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Data-driven modeling of cellular stimulation, signaling and output response in RAW 264.7 cells.

Wu Y, Johnson GL, Gomez SM.

J Mol Signal. 2008 May 22;3:11.PMID: 18498628 [PubMed - in process]Related articlesFree article

Identification of signaling components required for the prediction of cytokine release in RAW 264.7 macrophages.

Pradervand S, Maurya MR, Subramaniam S.

Genome Biol. 2006;7(2):R11. Epub 2006 Feb 20.PMID: 16507166 [PubMed - indexed for MEDLINE]Related articlesFree article

Identification of crosstalk between phosphoprotein signaling pathways in RAW 264.7 macrophage cells.

Gupta S, Maurya MR, Subramaniam S.

PLoS Comput Biol. 2010 Jan 29;6(1):e1000654.PMID: 20126526 [PubMed - in process]Related articlesFree article

A model of TLR4 signaling and tolerance using a qualitative, particle-event-based method: introduction of spatially configured stochastic reaction chambers (SCSRC).

An G.

Math Biosci. 2009 Jan;217(1):43-52. Epub 2008 Oct 11.PMID: 18950646 [PubMed - indexed for MEDLINE]Related articles

The unfoldomics decade: an update on intrinsically disordered proteins.

Dunker AK, Oldfield CJ, Meng J, Romero P, Yang JY, Chen JW, Vacic V, Obradovic Z, Uversky VN.

BMC Genomics. 2008 Sep 16;9 Suppl 2:S1.PMID: 18831774 [PubMed - indexed for MEDLINE]Related articlesFree article

A dynamic analysis of IRS-PKR signaling in liver cells: a discrete modeling approach.

Wu M, Yang X, Chan C.

PLoS One. 2009 Dec 1;4(12):e8040.PMID: 19956598 [PubMed - in process]Related articlesFree article

Exploration of quantitative scoring metrics to compare systems biology modeling approaches.

Kaddi C, Oden ED, Quo CF, Wang MD.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:1121-4.PMID: 18002159 [PubMed - indexed for MEDLINE]Related articles

Beta-cell function and mass in type 2 diabetes.

Larsen MO.

Dan Med Bull. 2009 Aug;56(3):153-64.PMID: 19728971 [PubMed - indexed for MEDLINE]Related articles

Illuminating signaling network functional biology through quantitative phosphoproteomic mass spectrometry.

Tedford NC, White FM, Radding JA.

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Comparative chemometric modeling of cytochrome 3A4 inhibitory activity of structurally diverse compounds using stepwise MLR, FA-MLR, PLS, GFA, G/PLS and ANN techniques.

Roy K, Pratim Roy P.

Eur J Med Chem. 2009 Jul;44(7):2913-22. Epub 2008 Dec 16.PMID: 19128860 [PubMed - indexed for MEDLINE]Related articles

Comparative multiple quantitative structure-retention relationships modeling of gas chromatographic retention time of essential oils using multiple linear regression, principal component regression, and partial least squares techniques.

Qin LT, Liu SS, Liu HL, Tong J.

J Chromatogr A. 2009 Jul 3;1216(27):5302-12. Epub 2009 May 15.PMID: 19486989 [PubMed - indexed for MEDLINE]Related articles

Systematic identifiability testing for unambiguous mechanistic modeling--application to JAK-STAT, MAP kinase, and NF-kappaB signaling pathway models.

Quaiser T, Mönnigmann M.

BMC Syst Biol. 2009 May 9;3:50.PMID: 19426527 [PubMed - indexed for MEDLINE]Related articlesFree article

Bioinformatics of cellular signalling.

Subramaniam S; Bioinformatics Core Laboratory.

Novartis Found Symp. 2002;247:104-16; discussion 116-8, 119-28, 244-52. Review.PMID: 12539952 [PubMed - indexed for MEDLINE]Related articles

Multiway modeling and analysis in stem cell systems biology.

Yener B, Acar E, Aguis P, Bennett K, Vandenberg SL, Plopper GE.

BMC Syst Biol. 2008 Jul 14;2:63.PMID: 18625054 [PubMed - indexed for MEDLINE]Related articlesFree article

THE FATE OF THE GIANT CELLS IN HEALING TUBERCULOUS TISSUE, AS OBSERVED IN A CASE OF HEALING TUBERCULOUS MENINGITIS.

Hektoen L.

J Exp Med. 1898 Jan 1;3(1):21-52.PMID: 19866866 [PubMed - as supplied by publisher]Related articlesFree article

Simulation-based model checking approach to cell fate specification during Caenorhabditis elegans vulval development by hybrid functional Petri net with extension.

Li C, Nagasaki M, Ueno K, Miyano S.

BMC Syst Biol. 2009 Apr 27;3:42.PMID: 19393101 [PubMed - indexed for MEDLINE]Related articlesFree article

Computational disease modeling - fact or fiction?

Tegnér JN, Compte A, Auffray C, An G, Cedersund G, Clermont G, Gutkin B, Oltvai ZN, Stephan KE, Thomas R, Villoslada P.

BMC Syst Biol. 2009 Jun 4;3:56.PMID: 19497118 [PubMed - indexed for MEDLINE]Related articlesFree article

The crosstalk between EGF, IGF, and Insulin cell signaling pathways--computational and experimental analysis.

Zielinski R, Przytycki PF, Zheng J, Zhang D, Przytycka TM, Capala J.

BMC Syst Biol. 2009 Sep 4;3:88.PMID: 19732446 [PubMed - indexed for MEDLINE]Related articlesFree article

Adapting a geographical information system-based water resource management to the needs of the Romanian water authorities.

Soutter M, Alexandrescu M, Schenk C, Drobot R.

Environ Sci Pollut Res Int. 2009 Aug;16 Suppl 1:S33-41. Epub 2008 Nov 8.PMID: 18998185 [PubMed - indexed for MEDLINE]Related articles

Effects of long-term exposure to traffic-related air pollution on respiratory and cardiovascular mortality in the Netherlands: the NLCS-AIR study.

Brunekreef B, Beelen R, Hoek G, Schouten L, Bausch-Goldbohm S, Fischer P, Armstrong B, Hughes E, Jerrett M, van den Brandt P.

Res Rep Health Eff Inst. 2009 Mar;(139):5-71; discussion 73-89.PMID: 19554969 [PubMed - indexed for MEDLINE]Related articles