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Results: 1 to 20 of 142

1.

The Multiscale Systems Immunology project: software for cell-based immunological simulation.

Mitha F, Lucas TA, Feng F, Kepler TB, Chan C.

Source Code Biol Med. 2008 Apr 28;3:6.PMID: 18442405 [PubMed - in process]Related articlesFree article

2.

A model of TLR4 signaling and tolerance using a qualitative, particle-event-based method: introduction of spatially configured stochastic reaction chambers (SCSRC).

An G.

Math Biosci. 2009 Jan;217(1):43-52. Epub 2008 Oct 11.PMID: 18950646 [PubMed - indexed for MEDLINE]Related articles

3.

The application of multiscale modelling to the process of development and prevention of stenosis in a stented coronary artery.

Evans DJ, Lawford PV, Gunn J, Walker D, Hose DR, Smallwood RH, Chopard B, Krafczyk M, Bernsdorf J, Hoekstra A.

Philos Transact A Math Phys Eng Sci. 2008 Sep 28;366(1879):3343-60.PMID: 18603527 [PubMed - indexed for MEDLINE]Related articlesFree article

4.

From biophysics to behavior: Catacomb2 and the design of biologically-plausible models for spatial navigation.

Cannon RC, Hasselmo ME, Koene RA.

Neuroinformatics. 2003;1(1):3-42.PMID: 15055391 [PubMed - indexed for MEDLINE]Related articles

5.

Easier surveillance of climate-related health vulnerabilities through a Web-based spatial OLAP application.

Bernier E, Gosselin P, Badard T, Bédard Y.

Int J Health Geogr. 2009 Apr 3;8:18.PMID: 19344512 [PubMed - indexed for MEDLINE]Related articlesFree article

6.

Simulation-based model checking approach to cell fate specification during Caenorhabditis elegans vulval development by hybrid functional Petri net with extension.

Li C, Nagasaki M, Ueno K, Miyano S.

BMC Syst Biol. 2009 Apr 27;3:42.PMID: 19393101 [PubMed - indexed for MEDLINE]Related articlesFree article

7.

Multiscale modeling in computational biomechanics.

Tawhai M, Bischoff J, Einstein D, Erdemir A, Guess T, Reinbolt J.

IEEE Eng Med Biol Mag. 2009 May-Jun;28(3):41-9.PMID: 19457733 [PubMed - in process]Related articles

8.

A software framework for multiscale and multilevel physiological model integration and simulation.

Erson EZ, Cavuşoğlu MC.

Conf Proc IEEE Eng Med Biol Soc. 2008;2008:5449-53.PMID: 19163950 [PubMed - indexed for MEDLINE]Related articles

9.

Multi-timescale event-scheduling in multi-agent immune simulation models.

Guo Z, Tay JC.

Biosystems. 2008 Jan;91(1):126-45. Epub 2007 Aug 30.PMID: 17919809 [PubMed - indexed for MEDLINE]Related articles

10.

FERN - a Java framework for stochastic simulation and evaluation of reaction networks.

Erhard F, Friedel CC, Zimmer R.

BMC Bioinformatics. 2008 Aug 29;9:356.PMID: 18755046 [PubMed - indexed for MEDLINE]Related articlesFree article

11.

Computational disease modeling - fact or fiction?

Tegnér JN, Compte A, Auffray C, An G, Cedersund G, Clermont G, Gutkin B, Oltvai ZN, Stephan KE, Thomas R, Villoslada P.

BMC Syst Biol. 2009 Jun 4;3:56.PMID: 19497118 [PubMed - indexed for MEDLINE]Related articlesFree article

12.

Kinetic modeling of biological systems.

Resat H, Petzold L, Pettigrew MF.

Methods Mol Biol. 2009;541:311-35. Review.PMID: 19381542 [PubMed - indexed for MEDLINE]Related articles

13.

Hybrid stochastic simplifications for multiscale gene networks.

Crudu A, Debussche A, Radulescu O.

BMC Syst Biol. 2009 Sep 7;3:89.PMID: 19735554 [PubMed - indexed for MEDLINE]Related articlesFree article

14.

PCSIM: A Parallel Simulation Environment for Neural Circuits Fully Integrated with Python.

Pecevski D, Natschläger T, Schuch K.

Front Neuroinformatics. 2009;3:11. Epub 2009 May 27.PMID: 19543450 [PubMed - as supplied by publisher]Related articlesFree article

15.

ALC: automated reduction of rule-based models.

Koschorreck M, Gilles ED.

BMC Syst Biol. 2008 Oct 31;2:91.PMID: 18973705 [PubMed - indexed for MEDLINE]Related articlesFree article

16.

Agent-based modeling of endotoxin-induced acute inflammatory response in human blood leukocytes.

Dong X, Foteinou PT, Calvano SE, Lowry SF, Androulakis IP.

PLoS One. 2010 Feb 18;5(2):e9249.PMID: 20174629 [PubMed - in process]Related articlesFree article

17.

TinkerCell: modular CAD tool for synthetic biology.

Chandran D, Bergmann FT, Sauro HM.

J Biol Eng. 2009 Oct 29;3:19.PMID: 19874625 [PubMed - in process]Related articlesFree article

18.

The virtual cell--a candidate co-ordinator for 'middle-out' modelling of biological systems.

Walker DC, Southgate J.

Brief Bioinform. 2009 Jul;10(4):450-61. Epub 2009 Mar 17. Review.PMID: 19293250 [PubMed - indexed for MEDLINE]Related articles

19.

Multi-agent systems in epidemiology: a first step for computational biology in the study of vector-borne disease transmission.

Roche B, Guégan JF, Bousquet F.

BMC Bioinformatics. 2008 Oct 15;9:435.PMID: 18922166 [PubMed - indexed for MEDLINE]Related articlesFree article

20.

Modeling genomic data with type attributes, balancing stability and maintainability.

Busch N, Wedemann G.

BMC Bioinformatics. 2009 Mar 27;10:97.PMID: 19327130 [PubMed - indexed for MEDLINE]Related articlesFree article

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