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    Results: 1 to 20 of 414

    1.

    The regulatory network of E. coli metabolism as a Boolean dynamical system exhibits both homeostasis and flexibility of response.

    Samal A, Jain S.

    BMC Syst Biol. 2008 Feb 29;2:21.PMID: 18312613 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Identifying dynamical modules from genetic regulatory systems: applications to the segment polarity network.

    Irons DJ, Monk NA.

    BMC Bioinformatics. 2007 Oct 25;8:413.PMID: 17961242 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    The correlation between architecture and mRNA abundance in the genetic regulatory network of Escherichia coli.

    Grondin Y, Raine DJ, Norris V.

    BMC Syst Biol. 2007 Jul 17;1:30.PMID: 17640329 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Phenotype prediction in regulated metabolic networks.

    Kaleta C, Centler F, di Fenizio PS, Dittrich P.

    BMC Syst Biol. 2008 Apr 25;2:37.PMID: 18439260 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Dynamical pathway analysis.

    Xiong H, Choe Y.

    BMC Syst Biol. 2008 Jan 27;2:9.PMID: 18221557 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Maximum number of fixed points in regulatory Boolean networks.

    Aracena J.

    Bull Math Biol. 2008 Jul;70(5):1398-409. Epub 2008 Feb 29.PMID: 18306974 [PubMed - indexed for MEDLINE]Related articles

    7.

    Internal versus external effector and transcription factor gene pairs differ in their relative chromosomal position in Escherichia coli.

    Janga SC, Salgado H, Collado-Vides J, Martínez-Antonio A.

    J Mol Biol. 2007 Apr 20;368(1):263-72. Epub 2007 Jan 12.PMID: 17321548 [PubMed - indexed for MEDLINE]Related articles

    8.

    Detecting hierarchical modularity in biological networks.

    Ravasz E.

    Methods Mol Biol. 2009;541:145-60. Review.PMID: 19381526 [PubMed - indexed for MEDLINE]Related articles

    9.

    Floral morphogenesis: stochastic explorations of a gene network epigenetic landscape.

    Alvarez-Buylla ER, Chaos A, Aldana M, Benítez M, Cortes-Poza Y, Espinosa-Soto C, Hartasánchez DA, Lotto RB, Malkin D, Escalera Santos GJ, Padilla-Longoria P.

    PLoS One. 2008;3(11):e3626. Epub 2008 Nov 3.PMID: 18978941 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    Predicting synthetic rescues in metabolic networks.

    Motter AE, Gulbahce N, Almaas E, Barabási AL.

    Mol Syst Biol. 2008;4:168. Epub 2008 Feb 12.PMID: 18277384 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Linking Cytoscape and the corynebacterial reference database CoryneRegNet.

    Baumbach J, Apeltsin L.

    BMC Genomics. 2008 Apr 21;9:184.PMID: 18426593 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Dynamic changes in protein functional linkage networks revealed by integration with gene expression data.

    Hegde SR, Manimaran P, Mande SC.

    PLoS Comput Biol. 2008 Nov;4(11):e1000237. Epub 2008 Nov 28.PMID: 19043542 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    An analysis of the class of gene regulatory functions implied by a biochemical model.

    Grefenstette J, Kim S, Kauffman S.

    Biosystems. 2006 May;84(2):81-90. Epub 2005 Dec 27.PMID: 16384633 [PubMed - indexed for MEDLINE]Related articles

    14.

    Synthetic tetracycline-inducible regulatory networks: computer-aided design of dynamic phenotypes.

    Sotiropoulos V, Kaznessis YN.

    BMC Syst Biol. 2007 Jan 9;1:7.PMID: 17408514 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Threshold-dominated regulation hides genetic variation in gene expression networks.

    Gjuvsland AB, Plahte E, Omholt SW.

    BMC Syst Biol. 2007 Dec 6;1:57.PMID: 18062810 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Critical dynamics in genetic regulatory networks: examples from four kingdoms.

    Balleza E, Alvarez-Buylla ER, Chaos A, Kauffman S, Shmulevich I, Aldana M.

    PLoS One. 2008 Jun 18;3(6):e2456.PMID: 18560561 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Activating and inhibiting connections in biological network dynamics.

    McDonald D, Waterbury L, Knight R, Betterton MD.

    Biol Direct. 2008 Dec 4;3:49.PMID: 19055800 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Comparative study of the transcriptional regulatory networks of E. coli and yeast: structural characteristics leading to marginal dynamic stability.

    Lee DS, Rieger H.

    J Theor Biol. 2007 Oct 21;248(4):618-26. Epub 2007 Jul 14.PMID: 17692874 [PubMed - indexed for MEDLINE]Related articles

    19.

    Integrating cybernetic modeling with pathway analysis provides a dynamic, systems-level description of metabolic control.

    Young JD, Henne KL, Morgan JA, Konopka AE, Ramkrishna D.

    Biotechnol Bioeng. 2008 Jun 15;100(3):542-59.PMID: 18438875 [PubMed - indexed for MEDLINE]Related articles

    20.

    An enzyme-centric approach for modelling non-linear biological complexity.

    Yang CR.

    BMC Syst Biol. 2008 Aug 1;2:70.PMID: 18671883 [PubMed - indexed for MEDLINE]Related articlesFree article

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