My NCBI | Sign In
RSS Settings
  • Search:

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

    Results: 1 to 20 of 487

    1.

    Assessment of composite motif discovery methods.

    Klepper K, Sandve GK, Abul O, Johansen J, Drablos F.

    BMC Bioinformatics. 2008 Feb 26;9:123.PMID: 18302777 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Improved benchmarks for computational motif discovery.

    Sandve GK, Abul O, Walseng V, Drabløs F.

    BMC Bioinformatics. 2007 Jun 8;8:193.PMID: 17559676 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    A survey of DNA motif finding algorithms.

    Das MK, Dai HK.

    BMC Bioinformatics. 2007 Nov 1;8 Suppl 7:S21. Review.PMID: 18047721 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Phylogeny based discovery of regulatory elements.

    Gertz J, Fay JC, Cohen BA.

    BMC Bioinformatics. 2006 May 22;7:266.PMID: 16716228 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Comparative analysis of regulatory motif discovery tools for transcription factor binding sites.

    Wei W, Yu XD.

    Genomics Proteomics Bioinformatics. 2007 May;5(2):131-42.PMID: 17893078 [PubMed - indexed for MEDLINE]Related articles

    6.

    STAMP: a web tool for exploring DNA-binding motif similarities.

    Mahony S, Benos PV.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W253-8. Epub 2007 May 3.PMID: 17478497 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    A novel Bayesian DNA motif comparison method for clustering and retrieval.

    Habib N, Kaplan T, Margalit H, Friedman N.

    PLoS Comput Biol. 2008 Feb 29;4(2):e1000010.PMID: 18463706 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Discovering motifs in ranked lists of DNA sequences.

    Eden E, Lipson D, Yogev S, Yakhini Z.

    PLoS Comput Biol. 2007 Mar 23;3(3):e39.PMID: 17381235 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Discriminative motif discovery in DNA and protein sequences using the DEME algorithm.

    Redhead E, Bailey TL.

    BMC Bioinformatics. 2007 Oct 15;8:385.PMID: 17937785 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    MATLIGN: a motif clustering, comparison and matching tool.

    Kankainen M, Löytynoja A.

    BMC Bioinformatics. 2007 Jun 8;8:189.PMID: 17559640 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Meta-analysis discovery of tissue-specific DNA sequence motifs from mammalian gene expression data.

    Huber BR, Bulyk ML.

    BMC Bioinformatics. 2006 Apr 27;7:229.PMID: 16643658 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    On counting position weight matrix matches in a sequence, with application to discriminative motif finding.

    Sinha S.

    Bioinformatics. 2006 Jul 15;22(14):e454-63.PMID: 16873507 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    A novel ensemble learning method for de novo computational identification of DNA binding sites.

    Chakravarty A, Carlson JM, Khetani RS, Gross RH.

    BMC Bioinformatics. 2007 Jul 12;8:249.PMID: 17626633 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    SCOPE: a web server for practical de novo motif discovery.

    Carlson JM, Chakravarty A, DeZiel CE, Gross RH.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W259-64. Epub 2007 May 7.PMID: 17485471 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Bioinformatic identification of novel putative photoreceptor specific cis-elements.

    Danko CG, McIlvain VA, Qin M, Knox BE, Pertsov AM.

    BMC Bioinformatics. 2007 Oct 22;8:407.PMID: 17953763 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Transcription factor binding site identification using the self-organizing map.

    Mahony S, Hendrix D, Golden A, Smith TJ, Rokhsar DS.

    Bioinformatics. 2005 May 1;21(9):1807-14. Epub 2005 Jan 12.PMID: 15647296 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Informative priors based on transcription factor structural class improve de novo motif discovery.

    Narlikar L, Gordân R, Ohler U, Hartemink AJ.

    Bioinformatics. 2006 Jul 15;22(14):e384-92.PMID: 16873497 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Bounded search for de novo identification of degenerate cis-regulatory elements.

    Carlson JM, Chakravarty A, Khetani RS, Gross RH.

    BMC Bioinformatics. 2006 May 15;7:254.PMID: 16700920 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    MUSA: a parameter free algorithm for the identification of biologically significant motifs.

    Mendes ND, Casimiro AC, Santos PM, Sá-Correia I, Oliveira AL, Freitas AT.

    Bioinformatics. 2006 Dec 15;22(24):2996-3002. Epub 2006 Oct 26.PMID: 17068086 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Combining comparative genomics with de novo motif discovery to identify human transcription factor DNA-binding motifs.

    Mao L, Zheng WJ.

    BMC Bioinformatics. 2006 Dec 12;7 Suppl 4:S21.PMID: 17217514 [PubMed - indexed for MEDLINE]Related articlesFree article

    Display Settings:

    Format
    Items per page
    Sort by

    Send to:

    Choose Destination

    Supplemental Content

    Filter your results:

    Find related data

    Recent activity