Warning: The NCBI web site requires JavaScript to function. more...
Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries.
Sidney J, Assarsson E, Moore C, Ngo S, Pinilla C, Sette A, Peters B.
Immunome Res. 2008 Jan 25;4:2.
Related citations
Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method.
Nielsen M, Lundegaard C, Lund O.
BMC Bioinformatics. 2007 Jul 4;8:238.
Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms.
Rajapakse M, Schmidt B, Feng L, Brusic V.
BMC Bioinformatics. 2007 Nov 22;8:459.
Detailed characterization of the peptide binding specificity of five common Patr class I MHC molecules.
Sidney J, Asabe S, Peters B, Purton KA, Chung J, Pencille TJ, Purcell R, Walker CM, Chisari FV, Sette A.
Immunogenetics. 2006 Jul;58(7):559-70. Epub 2006 Jun 22.
Class I MHC-peptide interaction: structural and functional aspects.
Ruppert J, Kubo RT, Sidney J, Grey HM, Sette A.
Behring Inst Mitt. 1994 Jul;(94):48-60. Review.
Peptide binding specificity of major histocompatibility complex class I resolved into an array of apparently independent subspecificities: quantitation by peptide libraries and improved prediction of binding.
Stryhn A, Pedersen LO, Romme T, Holm CB, Holm A, Buus S.
Eur J Immunol. 1996 Aug;26(8):1911-8.
Characterization of the peptide-binding specificity of the chimpanzee class I alleles A 0301 and A 0401 using a combinatorial peptide library.
Sidney J, Peters B, Moore C, Pencille TJ, Ngo S, Masterman KA, Asabe S, Pinilla C, Chisari FV, Sette A.
Immunogenetics. 2007 Sep;59(9):745-51. Epub 2007 Aug 16.
Role of HLA-A motifs in identification of potential CTL epitopes in human papillomavirus type 16 E6 and E7 proteins.
Kast WM, Brandt RM, Sidney J, Drijfhout JW, Kubo RT, Grey HM, Melief CJ, Sette A.
J Immunol. 1994 Apr 15;152(8):3904-12.
The P9 pocket of HLA-DQ2 (non-Aspbeta57) has no particular preference for negatively charged anchor residues found in other type 1 diabetes-predisposing non-Aspbeta57 MHC class II molecules.
Quarsten H, Paulsen G, Johansen BH, Thorpe CJ, Holm A, Buus S, Sollid LM.
Int Immunol. 1998 Aug;10(8):1229-36.
Toward the prediction of class I and II mouse major histocompatibility complex-peptide-binding affinity: in silico bioinformatic step-by-step guide using quantitative structure-activity relationships.
Hattotuwagama CK, Doytchinova IA, Flower DR.
Methods Mol Biol. 2007;409:227-45.
Peptide binding to the most frequent HLA-A class I alleles measured by quantitative molecular binding assays.
Sette A, Sidney J, del Guercio MF, Southwood S, Ruppert J, Dahlberg C, Grey HM, Kubo RT.
Mol Immunol. 1994 Aug;31(11):813-22.
Class I MHC-peptide interactions: structural requirements and functional implications.
Grey HM, Ruppert J, Vitiello A, Sidney J, Kast WM, Kubo RT, Sette A.
Cancer Surv. 1995;22:37-49. Review.
HLA class I supertypes: a revised and updated classification.
Sidney J, Peters B, Frahm N, Brander C, Sette A.
BMC Immunol. 2008 Jan 22;9:1.
Conserved MHC class I peptide binding motif between humans and rhesus macaques.
Dzuris JL, Sidney J, Appella E, Chesnut RW, Watkins DI, Sette A.
J Immunol. 2000 Jan 1;164(1):283-91.
Naturally processed HLA class II peptides reveal highly conserved immunogenic flanking region sequence preferences that reflect antigen processing rather than peptide-MHC interactions.
Godkin AJ, Smith KJ, Willis A, Tejada-Simon MV, Zhang J, Elliott T, Hill AV.
J Immunol. 2001 Jun 1;166(11):6720-7.
Peptide binding characteristics of the non-classical class Ib MHC molecule HLA-E assessed by a recombinant random peptide approach.
Stevens J, Joly E, Trowsdale J, Butcher GW.
BMC Immunol. 2001;2:5. Epub 2001 Jun 20.
HLA-A*26, HLA-B*4002, HLA-B*4006, and HLA-B*4801 alleles predispose to adult T cell leukemia: the limited recognition of HTLV type 1 tax peptide anchor motifs and epitopes to generate anti-HTLV type 1 tax CD8(+) cytotoxic T lymphocytes.
Yashiki S, Fujiyoshi T, Arima N, Osame M, Yoshinaga M, Nagata Y, Tara M, Nomura K, Utsunomiya A, Hanada S, Tajima K, Sonoda S.
AIDS Res Hum Retroviruses. 2001 Jul 20;17(11):1047-61.
An automated prediction of MHC class I-binding peptides based on positional scanning with peptide libraries.
Udaka K, Wiesmüller KH, Kienle S, Jung G, Tamamura H, Yamagishi H, Okumura K, Walden P, Suto T, Kawasaki T.
Immunogenetics. 2000 Aug;51(10):816-28.
A pattern search method for putative anchor residues in T cell epitopes.
Hobohm U, Meyerhans A.
Eur J Immunol. 1993 Jun;23(6):1271-6.
Quantitative prediction of mouse class I MHC peptide binding affinity using support vector machine regression (SVR) models.
Liu W, Meng X, Xu Q, Flower DR, Li T.
BMC Bioinformatics. 2006 Mar 31;7:182.
Filter your results:
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on