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    Results: 1 to 20 of 240

    1.

    The average mutual information profile as a genomic signature.

    Bauer M, Schuster SM, Sayood K.

    BMC Bioinformatics. 2008 Jan 25;9:48.PMID: 18218139 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Hierarchical structure analysis describing abnormal base composition of genomes.

    Ouyang Z, Liu JK, She ZS.

    Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Oct;72(4 Pt 1):041915. Epub 2005 Oct 14.PMID: 16383428 [PubMed - indexed for MEDLINE]Related articles

    3.

    Identifying characteristic scales in the human genome.

    Carpena P, Bernaola-Galván P, Coronado AV, Hackenberg M, Oliver JL.

    Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):032903. Epub 2007 Mar 16.PMID: 17500745 [PubMed - indexed for MEDLINE]Related articles

    4.

    Chromosome evolution with naked eye: palindromic context of the life origin.

    Larionov S, Loskutov A, Ryadchenko E.

    Chaos. 2008 Mar;18(1):013105.PMID: 18377056 [PubMed - indexed for MEDLINE]Related articles

    5.

    MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences.

    Kumar S, Nei M, Dudley J, Tamura K.

    Brief Bioinform. 2008 Jul;9(4):299-306. Epub 2008 Apr 16.PMID: 18417537 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Strainer: software for analysis of population variation in community genomic datasets.

    Eppley JM, Tyson GW, Getz WM, Banfield JF.

    BMC Bioinformatics. 2007 Oct 17;8:398.PMID: 17941997 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Complete nucleotide sequence of the Cryptomeria japonica D. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure of coniferous species.

    Hirao T, Watanabe A, Kurita M, Kondo T, Takata K.

    BMC Plant Biol. 2008 Jun 23;8:70.PMID: 18570682 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Evolutionary analysis of enzymes using Chisel.

    Rodriguez AA, Bompada T, Syed M, Shah PK, Maltsev N.

    Bioinformatics. 2007 Nov 15;23(22):2961-8. Epub 2007 Sep 13.PMID: 17855417 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Shannon information in complete genomes.

    Chang CH, Hsieh LC, Chen TY, Chen HD, Luo L, Lee HC.

    J Bioinform Comput Biol. 2005 Jun;3(3):587-608.PMID: 16108085 [PubMed - indexed for MEDLINE]Related articles

    10.

    Improving genome annotations using phylogenetic profile anomaly detection.

    Mikkelsen TS, Galagan JE, Mesirov JP.

    Bioinformatics. 2005 Feb 15;21(4):464-70. Epub 2004 Sep 16.PMID: 15374867 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Informational structure of two closely related eukaryotic genomes.

    Dehnert M, Helm WE, Hütt MT.

    Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Aug;74(2 Pt 1):021913. Epub 2006 Aug 15.PMID: 17025478 [PubMed - indexed for MEDLINE]Related articles

    12.

    Introduction to inferring evolutionary relationships.

    Page RD.

    Curr Protoc Bioinformatics. 2003 Feb;Chapter 6:Unit 6.1.PMID: 18428703 [PubMed - indexed for MEDLINE]Related articles

    13.

    Effect of the mutation rate and background size on the quality of pathogen identification.

    Reed C, Fofanov V, Putonti C, Chumakov S, Slezak T, Fofanov Y.

    Bioinformatics. 2007 Oct 15;23(20):2665-71. Epub 2007 Sep 19.PMID: 17881407 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Informatics for unveiling hidden genome signatures.

    Abe T, Kanaya S, Kinouchi M, Ichiba Y, Kozuki T, Ikemura T.

    Genome Res. 2003 Apr;13(4):693-702.PMID: 12671005 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Exploring the solution space of sorting by reversals, with experiments and an application to evolution.

    Braga MD, Sagot MF, Scornavacca C, Tannier E.

    IEEE/ACM Trans Comput Biol Bioinform. 2008 Jul-Sep;5(3):348-56.PMID: 18670039 [PubMed - indexed for MEDLINE]Related articles

    16.

    Computing the all-pairs quartet distance on a set of evolutionary trees.

    Stissing M, Mailund T, Pedersen CN, Brodal GS, Fagerberg R.

    J Bioinform Comput Biol. 2008 Feb;6(1):37-50.PMID: 18324744 [PubMed - indexed for MEDLINE]Related articles

    17.

    Using MODELTEST and PAUP* to select a model of nucleotide substitution.

    Posada D.

    Curr Protoc Bioinformatics. 2003 Feb;Chapter 6:Unit 6.5.PMID: 18428705 [PubMed - indexed for MEDLINE]Related articles

    18.

    Time-dependent ARMA modeling of genomic sequences.

    Zielinski JS, Bouaynaya N, Schonfeld D, O'Neill W.

    BMC Bioinformatics. 2008 Aug 12;9 Suppl 9:S14.PMID: 18793459 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Recurrence time statistics: versatile tools for genomic DNA sequence analysis.

    Cao Y, Tung WW, Gao JB.

    Proc IEEE Comput Syst Bioinform Conf. 2004:40-51.PMID: 16447998 [PubMed - indexed for MEDLINE]Related articles

    20.

    Comparative genomics of microbial pathogens and symbionts.

    Andersson SG, Alsmark C, Canbäck B, Davids W, Frank C, Karlberg O, Klasson L, Antoine-Legault B, Mira A, Tamas I.

    Bioinformatics. 2002;18 Suppl 2:S17.PMID: 12385978 [PubMed - indexed for MEDLINE]Related articlesFree article

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