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    Results: 1 to 20 of 165

    1.

    Reconstructing phylogenies from noisy quartets in polynomial time with a high success probability.

    Wu G, Kao MY, Lin G, You JH.

    Algorithms Mol Biol. 2008 Jan 24;3:1.PMID: 18218120 [PubMed]Related articlesFree article

    2.

    Constructing phylogenies from quartets: elucidation of eutherian superordinal relationships.

    Ben-Dor A, Chor B, Graur D, Ophir R, Pelleg D.

    J Comput Biol. 1998 Fall;5(3):377-90.PMID: 9773339 [PubMed - indexed for MEDLINE]Related articles

    3.

    Optimal algorithms for local vertex quartet cleaning.

    Della Vedova G, Wareham HT.

    Bioinformatics. 2002 Oct;18(10):1297-304.PMID: 12376373 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Fast computation of distance estimators.

    Elias I, Lagergren J.

    BMC Bioinformatics. 2007 Mar 13;8:89.PMID: 17355623 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    A signal-to-noise analysis of phylogeny estimation by neighbor-joining: Insufficiency of polynomial length sequences.

    Lacey MR, Chang JT.

    Math Biosci. 2006 Feb;199(2):188-215. Epub 2006 Jan 18.PMID: 16412478 [PubMed - indexed for MEDLINE]Related articles

    6.

    Short quartet puzzling: a new quartet-based phylogeny reconstruction algorithm.

    Snir S, Warnow T, Rao S.

    J Comput Biol. 2008 Jan-Feb;15(1):91-103.PMID: 18199023 [PubMed - indexed for MEDLINE]Related articles

    7.

    A sharp error probability estimate for the reconstruction of phylogenetic quartets by the four-point method.

    Lacey MR, Calmes J.

    J Comput Biol. 2009 Mar;16(3):443-56.PMID: 19254183 [PubMed - indexed for MEDLINE]Related articles

    8.

    Fast recovery of evolutionary trees with thousands of nodes.

    Csurös M.

    J Comput Biol. 2002;9(2):277-97.PMID: 12015882 [PubMed - indexed for MEDLINE]Related articles

    9.

    Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle.

    Desper R, Gascuel O.

    J Comput Biol. 2002;9(5):687-705.PMID: 12487758 [PubMed - indexed for MEDLINE]Related articles

    10.

    Fast calculation of the quartet distance between trees of arbitrary degrees.

    Christiansen C, Mailund T, Pedersen CN, Randers M, Stissing MS.

    Algorithms Mol Biol. 2006 Sep 25;1:16.PMID: 16999860 [PubMed]Related articlesFree article

    11.

    Quartet-based phylogeny reconstruction with answer set programming.

    Wu G, You JH, Lin G.

    IEEE/ACM Trans Comput Biol Bioinform. 2007 Jan-Mar;4(1):139-52.PMID: 17277421 [PubMed - indexed for MEDLINE]Related articles

    12.

    On the impossibility of reconstructing ancestral data and phylogenies.

    Mossel E.

    J Comput Biol. 2003;10(5):669-76.PMID: 14633391 [PubMed - indexed for MEDLINE]Related articles

    13.

    Using max cut to enhance rooted trees consistency.

    Snir S, Rao S.

    IEEE/ACM Trans Comput Biol Bioinform. 2006 Oct-Dec;3(4):323-33.PMID: 17085842 [PubMed - indexed for MEDLINE]Related articles

    14.

    ML or NJ-MCL? A comparison between two robust phylogenetic methods.

    Som A.

    Comput Biol Chem. 2009 Oct;33(5):373-8. Epub 2009 Jul 19.PMID: 19679513 [PubMed - indexed for MEDLINE]Related articles

    15.

    Quartet-based phylogenetic inference: improvements and limits.

    Ranwez V, Gascuel O.

    Mol Biol Evol. 2001 Jun;18(6):1103-16.PMID: 11371598 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    A new fast heuristic for computing the breakpoint phylogeny and experimental phylogenetic analyses of real and synthetic data.

    Cosner ME, Jansen RK, Moret BM, Raubeson LA, Wang LS, Warnow T, Wyman S.

    Proc Int Conf Intell Syst Mol Biol. 2000;8:104-15.PMID: 10977071 [PubMed - indexed for MEDLINE]Related articles

    17.

    Clearcut: a fast implementation of relaxed neighbor joining.

    Sheneman L, Evans J, Foster JA.

    Bioinformatics. 2006 Nov 15;22(22):2823-4. Epub 2006 Sep 18.PMID: 16982706 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Simultaneous phylogeny reconstruction and multiple sequence alignment.

    Yue F, Shi J, Tang J.

    BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S11.PMID: 19208110 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    QDist--quartet distance between evolutionary trees.

    Mailund T, Pedersen CN.

    Bioinformatics. 2004 Jul 10;20(10):1636-7. Epub 2004 Feb 12.PMID: 14962942 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Neighbor joining algorithms for inferring phylogenies via LCA distances.

    Gronau I, Moran S.

    J Comput Biol. 2007 Jan-Feb;14(1):1-15.PMID: 17381342 [PubMed - indexed for MEDLINE]Related articles

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