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    Results: 1 to 20 of 513

    1.

    The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.

    Avraham S, Tung CW, Ilic K, Jaiswal P, Kellogg EA, McCouch S, Pujar A, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Stevens P, Vincent L, Zapata F, Ware D.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D449-54.PMID: 18194960 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages.

    Jaiswal P, Avraham S, Ilic K, Kellogg EA, McCouch S, Pujar A, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Stevens P, Vincent L, Ware D, Zapata F.

    Comp Funct Genomics. 2005;6(7-8):388-97.PMID: 18629207 [PubMed - in process]Related articlesFree article

    3.

    The Gene Ontology (GO) project in 2006.

    Gene Ontology Consortium.

    Nucleic Acids Res. 2006 Jan 1;34(Database issue):D322-6.PMID: 16381878 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    The Gene Ontology project in 2008.

    Gene Ontology Consortium.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D440-4. Epub 2007 Nov 4.PMID: 17984083 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant.

    Ilic K, Kellogg EA, Jaiswal P, Zapata F, Stevens PF, Vincent LP, Avraham S, Reiser L, Pujar A, Sachs MM, Whitman NT, McCouch SR, Schaeffer ML, Ware DH, Stein LD, Rhee SY.

    Plant Physiol. 2007 Feb;143(2):587-99. Epub 2006 Dec 1.PMID: 17142475 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Whole-plant growth stage ontology for angiosperms and its application in plant biology.

    Pujar A, Jaiswal P, Kellogg EA, Ilic K, Vincent L, Avraham S, Stevens P, Zapata F, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Ware D, McCouch S.

    Plant Physiol. 2006 Oct;142(2):414-28. Epub 2006 Aug 11.PMID: 16905665 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Tetrahymena Genome Database (TGD): a new genomic resource for Tetrahymena thermophila research.

    Stover NA, Krieger CJ, Binkley G, Dong Q, Fisk DG, Nash R, Sethuraman A, Weng S, Cherry JM.

    Nucleic Acids Res. 2006 Jan 1;34(Database issue):D500-3.PMID: 16381920 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Gramene: development and integration of trait and gene ontologies for rice.

    Jaiswal P, Ware D, Ni J, Chang K, Zhao W, Schmidt S, Pan X, Clark K, Teytelman L, Cartinhour S, Stein L, McCouch S.

    Comp Funct Genomics. 2002;3(2):132-6.PMID: 18628886 [PubMed - in process]Related articlesFree article

    9.

    Gene Ontology annotations at SGD: new data sources and annotation methods.

    Hong EL, Balakrishnan R, Dong Q, Christie KR, Park J, Binkley G, Costanzo MC, Dwight SS, Engel SR, Fisk DG, Hirschman JE, Hitz BC, Krieger CJ, Livstone MS, Miyasato SR, Nash RS, Oughtred R, Skrzypek MS, Weng S, Wong ED, Zhu KK, Dolinski K, Botstein D, Cherry JM.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D577-81. Epub 2007 Nov 3.PMID: 17982175 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

    Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D1009-14. Epub 2007 Nov 5.PMID: 17986450 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Gramene, a tool for grass genomics.

    Ware DH, Jaiswal P, Ni J, Yap IV, Pan X, Clark KY, Teytelman L, Schmidt SC, Zhao W, Chang K, Cartinhour S, Stein LD, McCouch SR.

    Plant Physiol. 2002 Dec;130(4):1606-13. Review.PMID: 12481044 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    DynGO: a tool for visualizing and mining of Gene Ontology and its associations.

    Liu H, Hu ZZ, Wu CH.

    BMC Bioinformatics. 2005 Aug 9;6:201.PMID: 16091147 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Functional annotation of the Arabidopsis genome using controlled vocabularies.

    Berardini TZ, Mundodi S, Reiser L, Huala E, Garcia-Hernandez M, Zhang P, Mueller LA, Yoon J, Doyle A, Lander G, Moseyko N, Yoo D, Xu I, Zoeckler B, Montoya M, Miller N, Weems D, Rhee SY.

    Plant Physiol. 2004 Jun;135(2):745-55. Epub 2004 Jun 1.PMID: 15173566 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Gene Ontology annotation of the rice blast fungus, Magnaporthe oryzae.

    Meng S, Brown DE, Ebbole DJ, Torto-Alalibo T, Oh YY, Deng J, Mitchell TK, Dean RA.

    BMC Microbiol. 2009 Feb 19;9 Suppl 1:S8. Review.PMID: 19278556 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    SerbGO: searching for the best GO tool.

    Mosquera JL, Sánchez-Pla A.

    Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W368-71. Epub 2008 May 14.PMID: 18480123 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    The Innate Immune Database (IIDB).

    Korb M, Rust AG, Thorsson V, Battail C, Li B, Hwang D, Kennedy KA, Roach JC, Rosenberger CM, Gilchrist M, Zak D, Johnson C, Marzolf B, Aderem A, Shmulevich I, Bolouri H.

    BMC Immunol. 2008 Mar 5;9:7.PMID: 18321385 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    The plant ontology consortium and plant ontologies.

    The Plant Ontology Consortium.

    Comp Funct Genomics. 2002;3(2):137-42.PMID: 18628842 [PubMed - in process]Related articlesFree article

    18.

    The Gene Ontology (GO) database and informatics resource.

    Harris MA, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, Eilbeck K, Lewis S, Marshall B, Mungall C, Richter J, Rubin GM, Blake JA, Bult C, Dolan M, Drabkin H, Eppig JT, Hill DP, Ni L, Ringwald M, Balakrishnan R, Cherry JM, Christie KR, Costanzo MC, Dwight SS, Engel S, Fisk DG, Hirschman JE, Hong EL, Nash RS, Sethuraman A, Theesfeld CL, Botstein D, Dolinski K, Feierbach B, Berardini T, Mundodi S, Rhee SY, Apweiler R, Barrell D, Camon E, Dimmer E, Lee V, Chisholm R, Gaudet P, Kibbe W, Kishore R, Schwarz EM, Sternberg P, Gwinn M, Hannick L, Wortman J, Berriman M, Wood V, de la Cruz N, Tonellato P, Jaiswal P, Seigfried T, White R; Gene Ontology Consortium.

    Nucleic Acids Res. 2004 Jan 1;32(Database issue):D258-61.PMID: 14681407 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    WEGO: a web tool for plotting GO annotations.

    Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, Wang J, Li S, Li R, Bolund L, Wang J.

    Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W293-7.PMID: 16845012 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    PlantGDB: a resource for comparative plant genomics.

    Duvick J, Fu A, Muppirala U, Sabharwal M, Wilkerson MD, Lawrence CJ, Lushbough C, Brendel V.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D959-65. Epub 2007 Dec 6.PMID: 18063570 [PubMed - indexed for MEDLINE]Related articlesFree article

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