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    Results: 1 to 20 of 201

    1.

    Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray.

    Willenbrock H, Hallin PF, Wassenaar TM, Ussery DW.

    Genome Biol. 2007;8(12):R267.

    PMID:
    18088402
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Extensive genomic diversity in pathogenic Escherichia coli and Shigella Strains revealed by comparative genomic hybridization microarray.

    Fukiya S, Mizoguchi H, Tobe T, Mori H.

    J Bacteriol. 2004 Jun;186(12):3911-21.

    PMID:
    15175305
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Investigating the global genomic diversity of Escherichia coli using a multi-genome DNA microarray platform with novel gene prediction strategies.

    Jackson SA, Patel IR, Barnaba T, LeClerc JE, Cebula TA.

    BMC Genomics. 2011 Jul 6;12:349.

    PMID:
    21733163
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    A process for analysis of microarray comparative genomics hybridisation studies for bacterial genomes.

    Carter B, Wu G, Woodward MJ, Anjum MF.

    BMC Genomics. 2008 Jan 29;9:53.

    PMID:
    18230148
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Design of a seven-genome Escherichia coli microarray for comparative genomic profiling.

    Willenbrock H, Petersen A, Sekse C, Kiil K, Wasteson Y, Ussery DW.

    J Bacteriol. 2006 Nov;188(22):7713-21. Epub 2006 Sep 8.

    PMID:
    16963574
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    ArrayOme: a program for estimating the sizes of microarray-visualized bacterial genomes.

    Ou HY, Smith R, Lucchini S, Hinton J, Chaudhuri RR, Pallen M, Barer MR, Rajakumar K.

    Nucleic Acids Res. 2005 Jan 7;33(1):e3.

    PMID:
    15640440
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Genomic peculiarity of coding sequences and metabolic potential of probiotic Escherichia coli strain Nissle 1917 inferred from raw genome data.

    Sun J, Gunzer F, Westendorf AM, Buer J, Scharfe M, Jarek M, Gössling F, Blöcker H, Zeng AP.

    J Biotechnol. 2005 May 4;117(2):147-61.

    PMID:
    15823404
    [PubMed - indexed for MEDLINE]
    8.

    Interrogating genomic diversity of E. coli O157:H7 using DNA tiling arrays.

    Jackson SA, Mammel MK, Patel IR, Mays T, Albert TJ, LeClerc JE, Cebula TA.

    Forensic Sci Int. 2007 May 24;168(2-3):183-99. Epub 2006 Aug 28.

    PMID:
    16934953
    [PubMed - indexed for MEDLINE]
    9.

    DNA microarray for discrimination between pathogenic 0157:H7 EDL933 and non-pathogenic Escherichia coli strains.

    Wu CF, Valdes JJ, Bentley WE, Sekowski JW.

    Biosens Bioelectron. 2003 Oct 30;19(1):1-8.

    PMID:
    14558993
    [PubMed - indexed for MEDLINE]
    10.

    Complexity of the genomic diversity in enterohemorrhagic Escherichia coli O157 revealed by the combinational use of the O157 Sakai OligoDNA microarray and the Whole Genome PCR scanning.

    Ogura Y, Kurokawa K, Ooka T, Tashiro K, Tobe T, Ohnishi M, Nakayama K, Morimoto T, Terajima J, Watanabe H, Kuhara S, Hayashi T.

    DNA Res. 2006 Feb 28;13(1):3-14. Epub 2006 Feb 22.

    PMID:
    16766508
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    Selection-driven transcriptome polymorphism in Escherichia coli/Shigella species.

    Le Gall T, Darlu P, Escobar-Páramo P, Picard B, Denamur E.

    Genome Res. 2005 Feb;15(2):260-8.

    PMID:
    15687289
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths.

    Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, Bidet P, Bingen E, Bonacorsi S, Bouchier C, Bouvet O, Calteau A, Chiapello H, Clermont O, Cruveiller S, Danchin A, Diard M, Dossat C, Karoui ME, Frapy E, Garry L, Ghigo JM, Gilles AM, Johnson J, Le Bouguénec C, Lescat M, Mangenot S, Martinez-Jéhanne V, Matic I, Nassif X, Oztas S, Petit MA, Pichon C, Rouy Z, Ruf CS, Schneider D, Tourret J, Vacherie B, Vallenet D, Médigue C, Rocha EP, Denamur E.

    PLoS Genet. 2009 Jan;5(1):e1000344. Epub 2009 Jan 23.

    PMID:
    19165319
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Definition of the Escherichia coli MC4100 genome by use of a DNA array.

    Peters JE, Thate TE, Craig NL.

    J Bacteriol. 2003 Mar;185(6):2017-21.

    PMID:
    12618467
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence.

    Laing CR, Buchanan C, Taboada EN, Zhang Y, Karmali MA, Thomas JE, Gannon VP.

    BMC Genomics. 2009 Jun 29;10:287.

    PMID:
    19563677
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Comparison of 61 sequenced Escherichia coli genomes.

    Lukjancenko O, Wassenaar TM, Ussery DW.

    Microb Ecol. 2010 Nov;60(4):708-20. Epub 2010 Jul 11. Review.

    PMID:
    20623278
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Development of a serotype-specific DNA microarray for identification of some Shigella and pathogenic Escherichia coli strains.

    Li Y, Liu D, Cao B, Han W, Liu Y, Liu F, Guo X, Bastin DA, Feng L, Wang L.

    J Clin Microbiol. 2006 Dec;44(12):4376-83. Epub 2006 Oct 4.

    PMID:
    17021058
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Studying bacterial genome dynamics using microarray-based comparative genomic hybridization.

    Taboada EN, Luebbert CC, Nash JH.

    Methods Mol Biol. 2007;396:223-53.

    PMID:
    18025696
    [PubMed - indexed for MEDLINE]
    19.

    Validation of mixed-genome microarrays as a method for genetic discrimination.

    Wan Y, Broschat SL, Call DR.

    Appl Environ Microbiol. 2007 Mar;73(5):1425-32. Epub 2007 Jan 5.

    PMID:
    17209070
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Custom design and analysis of high-density oligonucleotide bacterial tiling microarrays.

    Thomassen GO, Rowe AD, Lagesen K, Lindvall JM, Rognes T.

    PLoS One. 2009 Jun 17;4(6):e5943.

    PMID:
    19536279
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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