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    Results: 1 to 20 of 100

    1.

    Evolution of allostery in the cyclic nucleotide binding module.

    Kannan N, Wu J, Anand GS, Yooseph S, Neuwald AF, Venter JC, Taylor SS.

    Genome Biol. 2007;8(12):R264.

    PMID:
    18076763
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    A generalized allosteric mechanism for cis-regulated cyclic nucleotide binding domains.

    Kornev AP, Taylor SS, Ten Eyck LF.

    PLoS Comput Biol. 2008 Apr 11;4(4):e1000056. Erratum in: PLoS Comput Biol. 2009 Jul;5(7). doi: 10.1371/annotation/43fd4ca3-0996-462c-ad89-395c369cbaa2.

    PMID:
    18404204
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Understanding cAMP-dependent allostery by NMR spectroscopy: comparative analysis of the EPAC1 cAMP-binding domain in its apo and cAMP-bound states.

    Mazhab-Jafari MT, Das R, Fotheringham SA, SilDas S, Chowdhury S, Melacini G.

    J Am Chem Soc. 2007 Nov 21;129(46):14482-92. Epub 2007 Oct 31.

    PMID:
    17973384
    [PubMed - indexed for MEDLINE]
    4.

    GAF domains: two-billion-year-old molecular switches that bind cyclic nucleotides.

    Martinez SE, Beavo JA, Hol WG.

    Mol Interv. 2002 Sep;2(5):317-23. Review.

    PMID:
    14993386
    [PubMed - indexed for MEDLINE]
    5.

    The cAMP binding domain: an ancient signaling module.

    Berman HM, Ten Eyck LF, Goodsell DS, Haste NM, Kornev A, Taylor SS.

    Proc Natl Acad Sci U S A. 2005 Jan 4;102(1):45-50. Epub 2004 Dec 23.

    PMID:
    15618393
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Structural and energetic analysis of activation by a cyclic nucleotide binding domain.

    Altieri SL, Clayton GM, Silverman WR, Olivares AO, De la Cruz EM, Thomas LR, Morais-Cabral JH.

    J Mol Biol. 2008 Sep 5;381(3):655-69. Epub 2008 Jun 10.

    PMID:
    18619611
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.
    8.

    Tracking the evolution of a cold stress associated gene family in cold tolerant grasses.

    Sandve SR, Rudi H, Asp T, Rognli OA.

    BMC Evol Biol. 2008 Sep 5;8:245.

    PMID:
    18775065
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Crystal structure of the human Fe65-PTB1 domain.

    Radzimanowski J, Ravaud S, Schlesinger S, Koch J, Beyreuther K, Sinning I, Wild K.

    J Biol Chem. 2008 Aug 22;283(34):23113-20. Epub 2008 Jun 11.

    PMID:
    18550529
    [PubMed - indexed for MEDLINE]
    Free Article
    10.

    Structural dynamics in the activation of Epac.

    Harper SM, Wienk H, Wechselberger RW, Bos JL, Boelens R, Rehmann H.

    J Biol Chem. 2008 Mar 7;283(10):6501-8. Epub 2007 Dec 31.

    PMID:
    18167352
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    Structure of yeast regulatory subunit: a glimpse into the evolution of PKA signaling.

    Rinaldi J, Wu J, Yang J, Ralston CY, Sankaran B, Moreno S, Taylor SS.

    Structure. 2010 Nov 10;18(11):1471-82.

    PMID:
    21070946
    [PubMed - indexed for MEDLINE]
    12.

    Evolution of domain combinations in protein kinases and its implications for functional diversity.

    Deshmukh K, Anamika K, Srinivasan N.

    Prog Biophys Mol Biol. 2010 Jan;102(1):1-15. Epub 2009 Dec 22. Review.

    PMID:
    20026163
    [PubMed - indexed for MEDLINE]
    13.

    Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements.

    Makarova KS, Wolf YI, van der Oost J, Koonin EV.

    Biol Direct. 2009 Aug 25;4:29.

    PMID:
    19706170
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    The Nod-like receptor (NLR) family: a tale of similarities and differences.

    Proell M, Riedl SJ, Fritz JH, Rojas AM, Schwarzenbacher R.

    PLoS One. 2008 Apr 30;3(4):e2119.

    PMID:
    18446235
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Expansion of protein domain repeats.

    Björklund AK, Ekman D, Elofsson A.

    PLoS Comput Biol. 2006 Aug 25;2(8):e114. Epub 2006 Jul 14.

    PMID:
    16933986
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Crystal structure of the GAF-B domain from human phosphodiesterase 10A complexed with its ligand, cAMP.

    Handa N, Mizohata E, Kishishita S, Toyama M, Morita S, Uchikubo-Kamo T, Akasaka R, Omori K, Kotera J, Terada T, Shirouzu M, Yokoyama S.

    J Biol Chem. 2008 Jul 11;283(28):19657-64. Epub 2008 May 13.

    PMID:
    18477562
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    Structures, mechanism, regulation and evolution of class III nucleotidyl cyclases.

    Sinha SC, Sprang SR.

    Rev Physiol Biochem Pharmacol. 2006;157:105-40. Review.

    PMID:
    17236651
    [PubMed - indexed for MEDLINE]
    18.

    Biochemistry and physiology of cyclic nucleotide phosphodiesterases: essential components in cyclic nucleotide signaling.

    Conti M, Beavo J.

    Annu Rev Biochem. 2007;76:481-511. Review.

    PMID:
    17376027
    [PubMed - indexed for MEDLINE]
    19.

    A model for agonism and antagonism in an ancient and ubiquitous cAMP-binding domain.

    Das R, Melacini G.

    J Biol Chem. 2007 Jan 5;282(1):581-93. Epub 2006 Oct 30.

    PMID:
    17074757
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    Evolutionary history and functional implications of protein domains and their combinations in eukaryotes.

    Itoh M, Nacher JC, Kuma K, Goto S, Kanehisa M.

    Genome Biol. 2007;8(6):R121.

    PMID:
    17588271
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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