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The JSpecView Project: an Open Source Java viewer and converter for JCAMP-DX, and XML spectral data files.
Lancashire RJ.
Chem Cent J. 2007 Dec 7;1:31.PMID: 18067663 [PubMed - in process]Related articlesFree article
Java applets for viewing one- and two-dimensional NMR spectra.
Sharman GJ.
Magn Reson Chem. 2006 Nov;44(11):1008-12.PMID: 16941576 [PubMed - indexed for MEDLINE]Related articles
An informatic pipeline for the data capture and submission of quantitative proteomic data using iTRAQ.
Siepen JA, Swainston N, Jones AR, Hart SR, Hermjakob H, Jones P, Hubbard SJ.
Proteome Sci. 2007 Feb 1;5:4.PMID: 17270041 [PubMed]Related articlesFree article
Janocchio--a Java applet for viewing 3D structures and calculating NMR couplings and NOEs.
Evans DA, Bodkin MJ, Baker SR, Sharman GJ.
Magn Reson Chem. 2007 Jul;45(7):595-600.PMID: 17534870 [PubMed - indexed for MEDLINE]Related articles
SPECTRa: the deposition and validation of primary chemistry research data in digital repositories.
Downing J, Murray-Rust P, Tonge AP, Morgan P, Rzepa HS, Cotterill F, Day N, Harvey MJ.
J Chem Inf Model. 2008 Aug;48(8):1571-81. Epub 2008 Jul 29.PMID: 18661966 [PubMed - indexed for MEDLINE]Related articles
Design of a modular and low-latency virtual-environment platform for applications in motor adaptation research, neurological disorders, and neurorehabilitation.
Myall DJ, MacAskill MR, Davidson PR, Anderson TJ, Jones RD.
IEEE Trans Neural Syst Rehabil Eng. 2008 Jun;16(3):298-309.PMID: 18586609 [PubMed - indexed for MEDLINE]Related articles
Visualization of Documents and Concepts in Neuroinformatics with the 3D-SE Viewer.
Naud A, Usui S, Ueda N, Taniguchi T.
Front Neuroinformatics. 2007;1:7. Epub 2007 Nov 2.PMID: 18974802 [PubMed - in process]Related articlesFree article
Internet image viewer (iiV).
Lee JT, Munch KR, Carlis JV, Pardo JV.
BMC Med Imaging. 2008 May 29;8:10.PMID: 18510765 [PubMed - indexed for MEDLINE]Related articlesFree article
Chemical Markup, XML, and the World Wide Web. 7. CMLSpect, an XML vocabulary for spectral data.
Kuhn S, Helmus T, Lancashire RJ, Murray-Rust P, Rzepa HS, Steinbeck C, Willighagen EL.
J Chem Inf Model. 2007 Nov-Dec;47(6):2015-34. Epub 2007 Sep 22.PMID: 17887743 [PubMed - indexed for MEDLINE]Related articles
The Chemistry Development Kit (CDK): an open-source Java library for Chemo- and Bioinformatics.
Steinbeck C, Han Y, Kuhn S, Horlacher O, Luttmann E, Willighagen E.
J Chem Inf Comput Sci. 2003 Mar-Apr;43(2):493-500.PMID: 12653513 [PubMed]Related articles
BioSAVE: display of scored annotation within a sequence context.
Pollock RF, Adryan B.
BMC Bioinformatics. 2008 Mar 20;9:157.PMID: 18366701 [PubMed - indexed for MEDLINE]Related articlesFree article
PhotochemCAD 2: a refined program with accompanying spectral databases for photochemical calculations.
Dixon JM, Taniguchi M, Lindsey JS.
Photochem Photobiol. 2005 Jan-Feb;81(1):212-3.PMID: 15571431 [PubMed]Related articles
Presenting and exploring biological pathways with PathVisio.
van Iersel MP, Kelder T, Pico AR, Hanspers K, Coort S, Conklin BR, Evelo C.
BMC Bioinformatics. 2008 Sep 25;9:399.PMID: 18817533 [PubMed - indexed for MEDLINE]Related articlesFree article
OSPACS: Ultrasound image management system.
Stott W, Ryan A, Jacobs IJ, Menon U, Bessant C, Jones C.
Source Code Biol Med. 2008 Jun 20;3:11.PMID: 18570637 [PubMed - in process]Related articlesFree article
A toolkit for publishing enhanced figures.
McMahon B, Hanson RM.
J Appl Crystallogr. 2008 Aug 1;41(Pt 4):811-814. Epub 2008 Jul 1.PMID: 19461848 [PubMed]Related articlesFree article
Open tools for storage and management of quantitative image data.
Moore J, Allan C, Burel JM, Loranger B, MacDonald D, Monk J, Swedlow JR.
Methods Cell Biol. 2008;85:555-70.PMID: 18155479 [PubMed - indexed for MEDLINE]Related articles
BioLit: integrating biological literature with databases.
Fink JL, Kushch S, Williams PR, Bourne PE.
Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W385-9. Epub 2008 May 31.PMID: 18515836 [PubMed - indexed for MEDLINE]Related articlesFree article
Distributed chemical computing using ChemStar: an open source java remote method invocation architecture applied to large scale molecular data from PubChem.
Karthikeyan M, Krishnan S, Pandey AK, Bender A, Tropsha A.
J Chem Inf Model. 2008 Apr;48(4):691-703. Epub 2008 Apr 11.PMID: 18402434 [PubMed]Related articles
PGV - Prokaryotic Genome Viewer.
Marla S, Singh VK.
In Silico Biol. 2007;7(4-5):543-5.PMID: 18391243 [PubMed - indexed for MEDLINE]Related articles
MSDmotif: exploring protein sites and motifs.
Golovin A, Henrick K.
BMC Bioinformatics. 2008 Jul 17;9:312.PMID: 18637174 [PubMed - indexed for MEDLINE]Related articlesFree article
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