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    Results: 1 to 20 of 246

    1.

    Retroviral enhancer detection insertions in zebrafish combined with comparative genomics reveal genomic regulatory blocks - a fundamental feature of vertebrate genomes.

    Kikuta H, Fredman D, Rinkwitz S, Lenhard B, Becker TS.

    Genome Biol. 2007;8 Suppl 1:S4. Review.

    PMID:
    18047696
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates.

    Kikuta H, Laplante M, Navratilova P, Komisarczuk AZ, Engström PG, Fredman D, Akalin A, Caccamo M, Sealy I, Howe K, Ghislain J, Pezeron G, Mourrain P, Ellingsen S, Oates AC, Thisse C, Thisse B, Foucher I, Adolf B, Geling A, Lenhard B, Becker TS.

    Genome Res. 2007 May;17(5):545-55. Epub 2007 Mar 26.

    PMID:
    17387144
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Comparative genomics of ParaHox clusters of teleost fishes: gene cluster breakup and the retention of gene sets following whole genome duplications.

    Siegel N, Hoegg S, Salzburger W, Braasch I, Meyer A.

    BMC Genomics. 2007 Sep 6;8:312.

    PMID:
    17822543
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Large-scale enhancer detection in the zebrafish genome.

    Ellingsen S, Laplante MA, König M, Kikuta H, Furmanek T, Hoivik EA, Becker TS.

    Development. 2005 Sep;132(17):3799-811. Epub 2005 Jul 27.

    PMID:
    16049110
    [PubMed - indexed for MEDLINE]
    Free Article
    5.

    Genomic regulatory blocks underlie extensive microsynteny conservation in insects.

    Engström PG, Ho Sui SJ, Drivenes O, Becker TS, Lenhard B.

    Genome Res. 2007 Dec;17(12):1898-908. Epub 2007 Nov 7.

    PMID:
    17989259
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes.

    Navratilova P, Fredman D, Hawkins TA, Turner K, Lenhard B, Becker TS.

    Dev Biol. 2009 Mar 15;327(2):526-40. Epub 2008 Nov 12.

    PMID:
    19073165
    [PubMed - indexed for MEDLINE]
    7.

    The random versus fragile breakage models of chromosome evolution: a matter of resolution.

    Becker TS, Lenhard B.

    Mol Genet Genomics. 2007 Nov;278(5):487-91. Epub 2007 Sep 13. Review.

    PMID:
    17851692
    [PubMed - indexed for MEDLINE]
    8.

    Enhancer detection in the zebrafish using pseudotyped murine retroviruses.

    Laplante M, Kikuta H, König M, Becker TS.

    Methods. 2006 Jul;39(3):189-98.

    PMID:
    16887366
    [PubMed - indexed for MEDLINE]
    9.

    Comparative genomics and evolution of conserved noncoding elements (CNE) in rainbow trout.

    Moghadam HK, Ferguson MM, Danzmann RG.

    BMC Genomics. 2009 Jun 23;10:278.

    PMID:
    19549339
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Expression profiling and comparative genomics identify a conserved regulatory region controlling midline expression in the zebrafish embryo.

    Dickmeis T, Plessy C, Rastegar S, Aanstad P, Herwig R, Chalmel F, Fischer N, Strähle U.

    Genome Res. 2004 Feb;14(2):228-38. Epub 2004 Jan 12.

    PMID:
    14718378
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention.

    Hufton AL, Mathia S, Braun H, Georgi U, Lehrach H, Vingron M, Poustka AJ, Panopoulou G.

    Genome Res. 2009 Nov;19(11):2036-51. Epub 2009 Aug 24.

    PMID:
    19704032
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Zebrafish enhancer detection (ZED) vector: a new tool to facilitate transgenesis and the functional analysis of cis-regulatory regions in zebrafish.

    Bessa J, Tena JJ, de la Calle-Mustienes E, Fernández-Miñán A, Naranjo S, Fernández A, Montoliu L, Akalin A, Lenhard B, Casares F, Gómez-Skarmeta JL.

    Dev Dyn. 2009 Sep;238(9):2409-17.

    PMID:
    19653328
    [PubMed - indexed for MEDLINE]
    Free Article
    13.

    Insertional mutagenesis by the Tol2 transposon-mediated enhancer trap approach generated mutations in two developmental genes: tcf7 and synembryn-like.

    Nagayoshi S, Hayashi E, Abe G, Osato N, Asakawa K, Urasaki A, Horikawa K, Ikeo K, Takeda H, Kawakami K.

    Development. 2008 Jan;135(1):159-69.

    PMID:
    18065431
    [PubMed - indexed for MEDLINE]
    Free Article
    14.

    Enhancer trapping in zebrafish using the Sleeping Beauty transposon.

    Balciunas D, Davidson AE, Sivasubbu S, Hermanson SB, Welle Z, Ekker SC.

    BMC Genomics. 2004 Sep 3;5(1):62.

    PMID:
    15347431
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Cracking the genome's second code: enhancer detection by combined phylogenetic footprinting and transgenic fish and frog embryos.

    Allende ML, Manzanares M, Tena JJ, Feijóo CG, Gómez-Skarmeta JL.

    Methods. 2006 Jul;39(3):212-9.

    PMID:
    16806968
    [PubMed - indexed for MEDLINE]
    16.

    Highly conserved regulatory elements around the SHH gene may contribute to the maintenance of conserved synteny across human chromosome 7q36.3.

    Goode DK, Snell P, Smith SF, Cooke JE, Elgar G.

    Genomics. 2005 Aug;86(2):172-81.

    PMID:
    15939571
    [PubMed - indexed for MEDLINE]
    17.

    Comparative functional genomics revealed conservation and diversification of three enhancers of the isl1 gene for motor and sensory neuron-specific expression.

    Uemura O, Okada Y, Ando H, Guedj M, Higashijima S, Shimazaki T, Chino N, Okano H, Okamoto H.

    Dev Biol. 2005 Feb 15;278(2):587-606.

    PMID:
    15680372
    [PubMed - indexed for MEDLINE]
    18.

    Highly conserved non-coding sequences are associated with vertebrate development.

    Woolfe A, Goodson M, Goode DK, Snell P, McEwen GK, Vavouri T, Smith SF, North P, Callaway H, Kelly K, Walter K, Abnizova I, Gilks W, Edwards YJ, Cooke JE, Elgar G.

    PLoS Biol. 2005 Jan;3(1):e7. Epub 2004 Nov 11.

    PMID:
    15630479
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Genomic features and computational identification of human microRNAs under long-range developmental regulation.

    Sheng Y, Previti C.

    BMC Genomics. 2011 May 27;12:270.

    PMID:
    21619633
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    Human-zebrafish non-coding conserved elements act in vivo to regulate transcription.

    Shin JT, Priest JR, Ovcharenko I, Ronco A, Moore RK, Burns CG, MacRae CA.

    Nucleic Acids Res. 2005 Sep 22;33(17):5437-45. Print 2005.

    PMID:
    16179648
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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