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    Results: 1 to 20 of 839

    1.

    Parameters of proteome evolution from histograms of amino-acid sequence identities of paralogous proteins.

    Axelsen JB, Yan KK, Maslov S.

    Biol Direct. 2007 Nov 26;2:32.

    PMID:
    18039386
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Modeling protein network evolution under genome duplication and domain shuffling.

    Evlampiev K, Isambert H.

    BMC Syst Biol. 2007 Nov 13;1:49.

    PMID:
    17999763
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Simple stochastic birth and death models of genome evolution: was there enough time for us to evolve?

    Karev GP, Wolf YI, Koonin EV.

    Bioinformatics. 2003 Oct 12;19(15):1889-900.

    PMID:
    14555621
    [PubMed - indexed for MEDLINE]
    Free Article
    4.

    Upstream plasticity and downstream robustness in evolution of molecular networks.

    Maslov S, Sneppen K, Eriksen KA, Yan KK.

    BMC Evol Biol. 2004 Mar 8;4:9.

    PMID:
    15070432
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Comparative study of human mitochondrial proteome reveals extensive protein subcellular relocalization after gene duplications.

    Wang X, Huang Y, Lavrov DV, Gu X.

    BMC Evol Biol. 2009 Nov 30;9:275.

    PMID:
    19948060
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Modeling gene and genome duplications in eukaryotes.

    Maere S, De Bodt S, Raes J, Casneuf T, Van Montagu M, Kuiper M, Van de Peer Y.

    Proc Natl Acad Sci U S A. 2005 Apr 12;102(15):5454-9. Epub 2005 Mar 30.

    PMID:
    15800040
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Internal gene duplication in the evolution of prokaryotic transmembrane proteins.

    Shimizu T, Mitsuke H, Noto K, Arai M.

    J Mol Biol. 2004 May 21;339(1):1-15.

    PMID:
    15123416
    [PubMed - indexed for MEDLINE]
    8.

    A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes.

    Koonin EV, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Rogozin IB, Smirnov S, Sorokin AV, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA.

    Genome Biol. 2004;5(2):R7. Epub 2004 Jan 15.

    PMID:
    14759257
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Maximal sequence length of exact match between members from a gene family during early evolution.

    Wen X, Guo XY, Fan LJ.

    J Zhejiang Univ Sci B. 2005 Jun;6(6):470-6.

    PMID:
    15909329
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Metabolism and evolution of Haemophilus influenzae deduced from a whole-genome comparison with Escherichia coli.

    Tatusov RL, Mushegian AR, Bork P, Brown NP, Hayes WS, Borodovsky M, Rudd KE, Koonin EV.

    Curr Biol. 1996 Mar 1;6(3):279-91.

    PMID:
    8805245
    [PubMed - indexed for MEDLINE]
    11.

    Gene duplication and gene conversion in the Caenorhabditis elegans genome.

    Semple C, Wolfe KH.

    J Mol Evol. 1999 May;48(5):555-64.

    PMID:
    10198121
    [PubMed - indexed for MEDLINE]
    12.

    Insights into the evolution of the snail superfamily from metazoan wide molecular phylogenies and expression data in annelids.

    Kerner P, Hung J, Béhague J, Le Gouar M, Balavoine G, Vervoort M.

    BMC Evol Biol. 2009 May 9;9:94.

    PMID:
    19426549
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Rates and patterns of gene duplication and loss in the human genome.

    Cotton JA, Page RD.

    Proc Biol Sci. 2005 Feb 7;272(1560):277-83.

    PMID:
    15705552
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.

    Aury JM, Jaillon O, Duret L, Noel B, Jubin C, Porcel BM, Ségurens B, Daubin V, Anthouard V, Aiach N, Arnaiz O, Billaut A, Beisson J, Blanc I, Bouhouche K, Câmara F, Duharcourt S, Guigo R, Gogendeau D, Katinka M, Keller AM, Kissmehl R, Klotz C, Koll F, Le Mouël A, Lepère G, Malinsky S, Nowacki M, Nowak JK, Plattner H, Poulain J, Ruiz F, Serrano V, Zagulski M, Dessen P, Bétermier M, Weissenbach J, Scarpelli C, Schächter V, Sperling L, Meyer E, Cohen J, Wincker P.

    Nature. 2006 Nov 9;444(7116):171-8. Epub 2006 Nov 1.

    PMID:
    17086204
    [PubMed - indexed for MEDLINE]
    15.

    Epigenetic silencing may aid evolution by gene duplication.

    Rodin SN, Riggs AD.

    J Mol Evol. 2003 Jun;56(6):718-29.

    PMID:
    12911035
    [PubMed - indexed for MEDLINE]
    16.

    Dealing with saturation at the amino acid level: a case study based on anciently duplicated zebrafish genes.

    Van de Peer Y, Frickey T, Taylor J, Meyer A.

    Gene. 2002 Aug 7;295(2):205-11.

    PMID:
    12354655
    [PubMed - indexed for MEDLINE]
    18.

    Gene family evolution: an in-depth theoretical and simulation analysis of non-linear birth-death-innovation models.

    Karev GP, Wolf YI, Berezovskaya FS, Koonin EV.

    BMC Evol Biol. 2004 Sep 9;4:32.

    PMID:
    15357876
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    The evolution of gene duplicates.

    Otto SP, Yong P.

    Adv Genet. 2002;46:451-83. Review.

    PMID:
    11931235
    [PubMed - indexed for MEDLINE]
    20.

    Evolving protein interaction networks through gene duplication.

    Pastor-Satorras R, Smith E, Solé RV.

    J Theor Biol. 2003 May 21;222(2):199-210.

    PMID:
    12727455
    [PubMed - indexed for MEDLINE]

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