PubMed

The internal initiation of translation in bovine viral diarrhea virus RNA depends on the presence of an RNA pseudoknot upstream of the initiation codon.

Moes L, Wirth M.

Virol J. 2007 Nov 22;4:124.PMID: 18034871 [PubMed - indexed for MEDLINE]Related articlesFree article

Internal entry of ribosomes is directed by the 5' noncoding region of classical swine fever virus and is dependent on the presence of an RNA pseudoknot upstream of the initiation codon.

Rijnbrand R, van der Straaten T, van Rijn PA, Spaan WJ, Bredenbeek PJ.

J Virol. 1997 Jan;71(1):451-7.PMID: 8985370 [PubMed - indexed for MEDLINE]Related articlesFree article

The influence of downstream protein-coding sequence on internal ribosome entry on hepatitis C virus and other flavivirus RNAs.

Rijnbrand R, Bredenbeek PJ, Haasnoot PC, Kieft JS, Spaan WJ, Lemon SM.

RNA. 2001 Apr;7(4):585-97.PMID: 11345437 [PubMed - indexed for MEDLINE]Related articlesFree article

Mutational analysis of the GB virus B internal ribosome entry site.

Rijnbrand R, Abell G, Lemon SM.

J Virol. 2000 Jan;74(2):773-83.PMID: 10623739 [PubMed - indexed for MEDLINE]Related articlesFree article

cis-acting RNA elements required for replication of bovine viral diarrhea virus-hepatitis C virus 5' nontranslated region chimeras.

Frolov I, McBride MS, Rice CM.

RNA. 1998 Nov;4(11):1418-35.PMID: 9814762 [PubMed - indexed for MEDLINE]Related articlesFree article

Pestivirus internal ribosome entry site (IRES) structure and function: elements in the 5' untranslated region important for IRES function.

Fletcher SP, Jackson RJ.

J Virol. 2002 May;76(10):5024-33.PMID: 11967318 [PubMed - indexed for MEDLINE]Related articlesFree article

Genetic analysis of the internal ribosome entry segment of bovine viral diarrhea virus.

Chon SK, Perez DR, Donis RO.

Virology. 1998 Nov 25;251(2):370-82.PMID: 9837801 [PubMed - indexed for MEDLINE]Related articles

Structural and functional analysis of the 5' untranslated region of coxsackievirus B3 RNA: In vivo translational and infectivity studies of full-length mutants.

Liu Z, Carthy CM, Cheung P, Bohunek L, Wilson JE, McManus BM, Yang D.

Virology. 1999 Dec 20;265(2):206-17.PMID: 10600593 [PubMed - indexed for MEDLINE]Related articles

An RNA pseudoknot is an essential structural element of the internal ribosome entry site located within the hepatitis C virus 5' noncoding region.

Wang C, Le SY, Ali N, Siddiqui A.

RNA. 1995 Jul;1(5):526-37.PMID: 7489514 [PubMed - indexed for MEDLINE]Related articlesFree article

Hepatitis C virus internal ribosome entry site RNA contains a tertiary structural element in a functional domain of stem-loop II.

Lyons AJ, Lytle JR, Gomez J, Robertson HD.

Nucleic Acids Res. 2001 Jun 15;29(12):2535-41.PMID: 11410661 [PubMed - indexed for MEDLINE]Related articlesFree article

A stem-loop motif formed by the immediate 5' terminus of the bovine viral diarrhea virus genome modulates translation as well as replication of the viral RNA.

Yu H, Isken O, Grassmann CW, Behrens SE.

J Virol. 2000 Jul;74(13):5825-35.PMID: 10846062 [PubMed - indexed for MEDLINE]Related articlesFree article

The influence of viral coding sequences on pestivirus IRES activity reveals further parallels with translation initiation in prokaryotes.

Fletcher SP, Ali IK, Kaminski A, Digard P, Jackson RJ.

RNA. 2002 Dec;8(12):1558-71.PMID: 12515388 [PubMed - indexed for MEDLINE]Related articlesFree article

Human La antigen is required for the hepatitis C virus internal ribosome entry site-mediated translation.

Ali N, Pruijn GJ, Kenan DJ, Keene JD, Siddiqui A.

J Biol Chem. 2000 Sep 8;275(36):27531-40.PMID: 10856291 [PubMed - indexed for MEDLINE]Related articlesFree article

Efficient translation initiation is required for replication of bovine viral diarrhea virus subgenomic replicons.

Myers TM, Kolupaeva VG, Mendez E, Baginski SG, Frolov I, Hellen CU, Rice CM.

J Virol. 2001 May;75(9):4226-38.PMID: 11287572 [PubMed - indexed for MEDLINE]Related articlesFree article

Alterations to both the primary and predicted secondary structure of stem-loop IIIc of the hepatitis C virus 1b 5' untranslated region (5'UTR) lead to mutants severely defective in translation which cannot be complemented in trans by the wild-type 5'UTR sequence.

Tang S, Collier AJ, Elliott RM.

J Virol. 1999 Mar;73(3):2359-64.PMID: 9971819 [PubMed - indexed for MEDLINE]Related articlesFree article

Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated.

Dmitriev SE, Andreev DE, Terenin IM, Olovnikov IA, Prassolov VS, Merrick WC, Shatsky IN.

Mol Cell Biol. 2007 Jul;27(13):4685-97. Epub 2007 Apr 30.PMID: 17470553 [PubMed - indexed for MEDLINE]Related articlesFree article

Structural elements in the 5'-untranslated region of giardiavirus transcript essential for internal ribosome entry site-mediated translation initiation.

Garlapati S, Wang CC.

Eukaryot Cell. 2005 Apr;4(4):742-54.PMID: 15821134 [PubMed - indexed for MEDLINE]Related articlesFree article

Unusual folding regions and ribosome landing pad within hepatitis C virus and pestivirus RNAs.

Le SY, Sonenberg N, Maizel JV Jr.

Gene. 1995 Mar 10;154(2):137-43.PMID: 7890155 [PubMed - indexed for MEDLINE]Related articles

Ribosomal binding to the internal ribosomal entry site of classical swine fever virus.

Kolupaeva VG, Pestova TV, Hellen CU.

RNA. 2000 Dec;6(12):1791-807.PMID: 11142379 [PubMed - indexed for MEDLINE]Related articlesFree article

Detection of tRNA-like structure through RNase P cleavage of viral internal ribosome entry site RNAs near the AUG start triplet.

Lyons AJ, Robertson HD.

J Biol Chem. 2003 Jul 18;278(29):26844-50. Epub 2003 May 12.PMID: 12746454 [PubMed - indexed for MEDLINE]Related articlesFree article