PubMed

Association of the matrix attachment region recognition signature with coding regions in Caenorhabditis elegans.

Anthony A, Blaxter M.

BMC Genomics. 2007 Nov 15;8:418.PMID: 18005410 [PubMed - indexed for MEDLINE]Related articlesFree article

A bipartite sequence element associated with matrix/scaffold attachment regions.

van Drunen CM, Sewalt RG, Oosterling RW, Weisbeek PJ, Smeekens SC, van Driel R.

Nucleic Acids Res. 1999 Jul 15;27(14):2924-30.PMID: 10390535 [PubMed - indexed for MEDLINE]Related articlesFree article

High frequency of matrix attachment regions and cut-like protein x/CCAAT-displacement protein and B cell regulator of IgH transcription binding sites flanking Ig V region genes.

Goebel P, Montalbano A, Ayers N, Kompfner E, Dickinson L, Webb CF, Feeney AJ.

J Immunol. 2002 Sep 1;169(5):2477-87.PMID: 12193717 [PubMed - indexed for MEDLINE]Related articlesFree article

Genome-wide in silico mapping of scaffold/matrix attachment regions in Arabidopsis suggests correlation of intragenic scaffold/matrix attachment regions with gene expression.

Rudd S, Frisch M, Grote K, Meyers BC, Mayer K, Werner T.

Plant Physiol. 2004 Jun;135(2):715-22.PMID: 15208419 [PubMed - indexed for MEDLINE]Related articlesFree article

The human growth hormone locus control region mediates long-distance transcriptional activation independent of nuclear matrix attachment regions.

Shewchuk BM, Cooke NE, Liebhaber SA.

Nucleic Acids Res. 2001 Aug 15;29(16):3356-61.PMID: 11504873 [PubMed - indexed for MEDLINE]Related articlesFree article

Conservation and functional significance of gene topology in the genome of Caenorhabditis elegans.

Chen N, Stein LD.

Genome Res. 2006 May;16(5):606-17. Epub 2006 Apr 10.PMID: 16606698 [PubMed - indexed for MEDLINE]Related articlesFree article

In silico prediction of scaffold/matrix attachment regions in large genomic sequences.

Frisch M, Frech K, Klingenhoff A, Cartharius K, Liebich I, Werner T.

Genome Res. 2002 Feb;12(2):349-54.PMID: 11827955 [PubMed - indexed for MEDLINE]Related articlesFree article

Chromatin loops are selectively anchored using scaffold/matrix-attachment regions.

Heng HH, Goetze S, Ye CJ, Liu G, Stevens JB, Bremer SW, Wykes SM, Bode J, Krawetz SA.

J Cell Sci. 2004 Mar 1;117(Pt 7):999-1008.PMID: 14996931 [PubMed - indexed for MEDLINE]Related articlesFree article

Mathematical model to predict regions of chromatin attachment to the nuclear matrix.

Singh GB, Kramer JA, Krawetz SA.

Nucleic Acids Res. 1997 Apr 1;25(7):1419-25.PMID: 9060438 [PubMed - indexed for MEDLINE]Related articlesFree article

Large-scale identification and mapping of nuclear matrix-attachment regions in the distal imprinted domain of mouse chromosome 7.

Purbowasito W, Suda C, Yokomine T, Zubair M, Sado T, Tsutsui K, Sasaki H.

DNA Res. 2004 Dec 31;11(6):391-407.PMID: 15871462 [PubMed - indexed for MEDLINE]Related articlesFree article

Comparative study and prediction of DNA fragments associated with various elements of the nuclear matrix.

Glazko GV, Rogozin IB, Glazkov MV.

Biochim Biophys Acta. 2001 Feb 16;1517(3):351-64.PMID: 11342213 [PubMed - indexed for MEDLINE]Related articles

Genome-scale identification of Caenorhabditis elegans regulatory elements by tiling-array mapping of DNase I hypersensitive sites.

Shi B, Guo X, Wu T, Sheng S, Wang J, Skogerbø G, Zhu X, Chen R.

BMC Genomics. 2009 Feb 25;10:92.PMID: 19243610 [PubMed - indexed for MEDLINE]Related articlesFree article

The nuclear protein p30 specifically interacts with a nuclear matrix attachment region from the rat genome.

Fedorov A, Lukyanov D, Rogoliński J, Widłak P, Podgornaya O, Rzeszowska-Wolny J.

Cell Mol Biol Lett. 2004;9(1):153-65.PMID: 15048159 [PubMed - indexed for MEDLINE]Related articlesFree article

Multiple cis-acting sequences implicate function diversity in nuclear matrix attachment regions of bovine mammary gland.

Lao WD, Zhang CS, Hu GF, Zhang XC, Wei YY.

Yi Chuan Xue Bao. 2003 May;30(5):397-406.PMID: 12924152 [PubMed - indexed for MEDLINE]Related articles

Identification and analysis of a matrix-attachment region 5' of the rat glutamate-dehydrogenase-encoding gene.

Das AT, Ludérus ME, Lamers WH.

Eur J Biochem. 1993 Aug 1;215(3):777-85.PMID: 8354285 [PubMed - indexed for MEDLINE]Related articlesFree article

NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans and C. briggsae.

Rambaldi D, Guffanti A, Morandi P, Cassata G.

BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S22.PMID: 16351749 [PubMed - indexed for MEDLINE]Related articlesFree article

[Functional arrangement of genomic DNA and structure of nuclear matrix]

Hibino Y.

Yakugaku Zasshi. 2000 Jun;120(6):520-33. Review. Japanese. PMID: 10860485 [PubMed - indexed for MEDLINE]Related articles

A rapid method of genomic array analysis of scaffold/matrix attachment regions (S/MARs) identifies a 2.5-Mb region of enhanced scaffold/matrix attachment at a human neocentromere.

Sumer H, Craig JM, Sibson M, Choo KH.

Genome Res. 2003 Jul;13(7):1737-43.PMID: 12840048 [PubMed - indexed for MEDLINE]Related articlesFree article

Breakpoint cluster regions of the AML-1 and ETO genes contain MAR elements and are preferentially associated with the nuclear matrix in proliferating HEL cells.

Iarovaia OV, Shkumatov P, Razin SV.

J Cell Sci. 2004 Sep 1;117(Pt 19):4583-90.PMID: 15331666 [PubMed - indexed for MEDLINE]Related articlesFree article

Sperm nuclear matrix association of the PRM1-->PRM2-->TNP2 domain is independent of Alu methylation.

Schmid C, Heng HH, Rubin C, Ye CJ, Krawetz SA.

Mol Hum Reprod. 2001 Oct;7(10):903-11.PMID: 11574659 [PubMed - indexed for MEDLINE]Related articlesFree article