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    Results: 1 to 20 of 173

    1.

    Features generated for computational splice-site prediction correspond to functional elements.

    Dogan RI, Getoor L, Wilbur WJ, Mount SM.

    BMC Bioinformatics. 2007 Oct 24;8:410.PMID: 17958908 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Computational analysis of splicing errors and mutations in human transcripts.

    Kurmangaliyev YZ, Gelfand MS.

    BMC Genomics. 2008 Jan 14;9:13.PMID: 18194514 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    SplicePort--an interactive splice-site analysis tool.

    Dogan RI, Getoor L, Wilbur WJ, Mount SM.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W285-91. Epub 2007 Jun 18.PMID: 17576680 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns.

    Dewey CN, Rogozin IB, Koonin EV.

    BMC Genomics. 2006 Dec 8;7:311.PMID: 17156453 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    A method for identifying alternative or cryptic donor splice sites within gene and mRNA sequences. Comparisons among sequences from vertebrates, echinoderms and other groups.

    Buckley KM, Florea LD, Smith LC.

    BMC Genomics. 2009 Jul 16;10:318.PMID: 19607703 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Computational searches for splicing signals.

    Zhang XH, Leslie CS, Chasin LA.

    Methods. 2005 Dec;37(4):292-305.PMID: 16314258 [PubMed - indexed for MEDLINE]Related articles

    7.

    Feature selection for splice site prediction: a new method using EDA-based feature ranking.

    Saeys Y, Degroeve S, Aeyels D, Rouzé P, Van de Peer Y.

    BMC Bioinformatics. 2004 May 21;5:64.PMID: 15154966 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Global control of aberrant splice-site activation by auxiliary splicing sequences: evidence for a gradient in exon and intron definition.

    Královicová J, Vorechovsky I.

    Nucleic Acids Res. 2007;35(19):6399-413. Epub 2007 Sep 18.PMID: 17881373 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Exonization of AluYa5 in the human ACE gene requires mutations in both 3' and 5' splice sites and is facilitated by a conserved splicing enhancer.

    Lei H, Day IN, Vorechovský I.

    Nucleic Acids Res. 2005 Jul 14;33(12):3897-906. Print 2005.PMID: 16027113 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    Alternative splicing of the human estrogen receptor alpha primary transcript: mechanisms of exon skipping.

    Ferro P, Forlani A, Muselli M, Pfeffer U.

    Int J Mol Med. 2003 Sep;12(3):355-63.PMID: 12883652 [PubMed - indexed for MEDLINE]Related articles

    11.

    Identification of alternative 5'/3' splice sites based on the mechanism of splice site competition.

    Xia H, Bi J, Li Y.

    Nucleic Acids Res. 2006;34(21):6305-13. Epub 2006 Nov 10.PMID: 17098928 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Using estimative reaction free energy to predict splice sites and their flanking competitors.

    Jin HY, Luo LF, Zhang LR.

    Gene. 2008 Nov 15;424(1-2):115-20. Epub 2008 Aug 7.PMID: 18761064 [PubMed - indexed for MEDLINE]Related articles

    13.

    Searching for splicing motifs.

    Chasin LA.

    Adv Exp Med Biol. 2007;623:85-106. Review.PMID: 18380342 [PubMed - indexed for MEDLINE]Related articles

    14.

    Splice site prediction with quadratic discriminant analysis using diversity measure.

    Zhang L, Luo L.

    Nucleic Acids Res. 2003 Nov 1;31(21):6214-20.PMID: 14576308 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Analysis and recognition of 5' UTR intron splice sites in human pre-mRNA.

    Eden E, Brunak S.

    Nucleic Acids Res. 2004 Feb 11;32(3):1131-42. Print 2004.PMID: 14960723 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Positional characterisation of false positives from computational prediction of human splice sites.

    Thanaraj TA.

    Nucleic Acids Res. 2000 Feb 1;28(3):744-54.PMID: 10637326 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Comparative analysis of sequence features involved in the recognition of tandem splice sites.

    Bortfeldt R, Schindler S, Szafranski K, Schuster S, Holste D.

    BMC Genomics. 2008 Apr 30;9:202.PMID: 18447903 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Sequence information for the splicing of human pre-mRNA identified by support vector machine classification.

    Zhang XH, Heller KA, Hefter I, Leslie CS, Chasin LA.

    Genome Res. 2003 Dec;13(12):2637-50.PMID: 14656968 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Distribution of exonic splicing enhancer elements in human genes.

    Wu Y, Zhang Y, Zhang J.

    Genomics. 2005 Sep;86(3):329-36.PMID: 16005179 [PubMed - indexed for MEDLINE]Related articles

    20.

    RNA landscape of evolution for optimal exon and intron discrimination.

    Zhang C, Li WH, Krainer AR, Zhang MQ.

    Proc Natl Acad Sci U S A. 2008 Apr 15;105(15):5797-802. Epub 2008 Apr 7.PMID: 18391195 [PubMed - indexed for MEDLINE]Related articlesFree article

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