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    Results: 1 to 20 of 305

    1.

    InSite: a computational method for identifying protein-protein interaction binding sites on a proteome-wide scale.

    Wang H, Segal E, Ben-Hur A, Li QR, Vidal M, Koller D.

    Genome Biol. 2007;8(9):R192.

    PMID:
    17868464
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Filtering high-throughput protein-protein interaction data using a combination of genomic features.

    Patil A, Nakamura H.

    BMC Bioinformatics. 2005 Apr 18;6:100.

    PMID:
    15833142
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Predicting co-complexed protein pairs using genomic and proteomic data integration.

    Zhang LV, Wong SL, King OD, Roth FP.

    BMC Bioinformatics. 2004 Apr 16;5:38.

    PMID:
    15090078
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs.

    Pitre S, Dehne F, Chan A, Cheetham J, Duong A, Emili A, Gebbia M, Greenblatt J, Jessulat M, Krogan N, Luo X, Golshani A.

    BMC Bioinformatics. 2006 Jul 27;7:365.

    PMID:
    16872538
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Computational verification of protein-protein interactions by orthologous co-expression.

    Tirosh I, Barkai N.

    BMC Bioinformatics. 2005 Mar 2;6:40.

    PMID:
    15740634
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    A computational approach for ordering signal transduction pathway components from genomics and proteomics Data.

    Liu Y, Zhao H.

    BMC Bioinformatics. 2004 Oct 25;5:158.

    PMID:
    15504238
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Automated yeast two-hybrid screening for nuclear receptor-interacting proteins.

    Albers M, Kranz H, Kober I, Kaiser C, Klink M, Suckow J, Kern R, Koegl M.

    Mol Cell Proteomics. 2005 Feb;4(2):205-13. Epub 2004 Dec 15.

    PMID:
    15604093
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    The Cartographers toolbox: building bigger and better human protein interaction networks.

    Sanderson CM.

    Brief Funct Genomic Proteomic. 2009 Jan;8(1):1-11. Epub 2009 Mar 12. Review.

    PMID:
    19282470
    [PubMed - indexed for MEDLINE]
    Free Article
    9.

    On the number of protein-protein interactions in the yeast proteome.

    Grigoriev A.

    Nucleic Acids Res. 2003 Jul 15;31(14):4157-61.

    PMID:
    12853633
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Inferring protein-protein interaction networks from protein complex data.

    Martin S, Mao Z, Chan LS, Rasheed S.

    Int J Bioinform Res Appl. 2007;3(4):480-92.

    PMID:
    18048314
    [PubMed - indexed for MEDLINE]
    11.

    Proteomics. Integrating interactomes.

    Gerstein M, Lan N, Jansen R.

    Science. 2002 Jan 11;295(5553):284-7. No abstract available.

    PMID:
    11786630
    [PubMed - indexed for MEDLINE]
    12.

    Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale.

    Li H, Li J, Wong L.

    Bioinformatics. 2006 Apr 15;22(8):989-96. Epub 2006 Jan 29.

    PMID:
    16446278
    [PubMed - indexed for MEDLINE]
    Free Article
    13.

    Data mining in protein interactomics. Six computational research challenges and opportunities.

    Chen JY, Sivachenko AY.

    IEEE Eng Med Biol Mag. 2005 May-Jun;24(3):95-102. No abstract available.

    PMID:
    15971847
    [PubMed - indexed for MEDLINE]
    14.

    Computational prediction of protein-protein interactions.

    Obenauer JC, Yaffe MB.

    Methods Mol Biol. 2004;261:445-68. Review.

    PMID:
    15064475
    [PubMed - indexed for MEDLINE]
    15.

    Computational analyses of high-throughput protein-protein interaction data.

    Chen Y, Xu D.

    Curr Protein Pept Sci. 2003 Jun;4(3):159-81. Review.

    PMID:
    12769716
    [PubMed - indexed for MEDLINE]
    16.

    Computational approaches to protein-protein interaction.

    Franzot G, Carugo O.

    J Struct Funct Genomics. 2003;4(4):245-55.

    PMID:
    15185965
    [PubMed - indexed for MEDLINE]
    17.

    Confirmation of human protein interaction data by human expression data.

    Hahn A, Rahnenführer J, Talwar P, Lengauer T.

    BMC Bioinformatics. 2005 May 6;6:112.

    PMID:
    15877815
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Increasing confidence of protein interactomes using network topological metrics.

    Chen J, Hsu W, Lee ML, Ng SK.

    Bioinformatics. 2006 Aug 15;22(16):1998-2004. Epub 2006 Jun 20.

    PMID:
    16787971
    [PubMed - indexed for MEDLINE]
    Free Article
    19.

    Are scale-free networks robust to measurement errors?

    Lin N, Zhao H.

    BMC Bioinformatics. 2005 May 16;6:119.

    PMID:
    15904487
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    A lock-and-key model for protein-protein interactions.

    Morrison JL, Breitling R, Higham DJ, Gilbert DR.

    Bioinformatics. 2006 Aug 15;22(16):2012-9. Epub 2006 Jun 20.

    PMID:
    16787977
    [PubMed - indexed for MEDLINE]
    Free Article

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