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    Results: 1 to 20 of 98

    1.

    Corpus refactoring: a feasibility study.

    Johnson HL, Baumgartner WA Jr, Krallinger M, Cohen KB, Hunter L.

    J Biomed Discov Collab. 2007 Sep 13;2:4.

    PMID:
    17854502
    [PubMed]
    Free PMC Article
    2.

    Final Report on Carcinogens Background Document for Formaldehyde.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2010 Jan;(10-5981):i-512.

    PMID:
    20737003
    [PubMed - as supplied by publisher]
    3.

    An open-source framework for large-scale, flexible evaluation of biomedical text mining systems.

    Baumgartner WA Jr, Cohen KB, Hunter L.

    J Biomed Discov Collab. 2008 Jan 29;3:1.

    PMID:
    18230184
    [PubMed]
    Free PMC Article
    4.

    Semi-automatic conversion of BioProp semantic annotation to PASBio annotation.

    Tsai RT, Dai HJ, Huang CH, Hsu WL.

    BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S18.

    PMID:
    19091017
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Assessment of disease named entity recognition on a corpus of annotated sentences.

    Jimeno A, Jimenez-Ruiz E, Lee V, Gaudan S, Berlanga R, Rebholz-Schuhmann D.

    BMC Bioinformatics. 2008 Apr 11;9 Suppl 3:S3.

    PMID:
    18426548
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Empirical data on corpus design and usage in biomedical natural language processing.

    Cohen KB, Fox L, Ogren PV, Hunter L.

    AMIA Annu Symp Proc. 2005:156-60.

    PMID:
    16779021
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Terminologies for text-mining; an experiment in the lipoprotein metabolism domain.

    Alexopoulou D, Wächter T, Pickersgill L, Eyre C, Schroeder M.

    BMC Bioinformatics. 2008 Apr 25;9 Suppl 4:S2.

    PMID:
    18460175
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Concept recognition for extracting protein interaction relations from biomedical text.

    Baumgartner WA Jr, Lu Z, Johnson HL, Caporaso JG, Paquette J, Lindemann A, White EK, Medvedeva O, Cohen KB, Hunter L.

    Genome Biol. 2008;9 Suppl 2:S9. Epub 2008 Sep 1.

    PMID:
    18834500
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    Rapid pattern development for concept recognition systems: application to point mutations.

    Caporaso JG, Baumgartner WA, Randolph DA, Cohen KB, Hunter L.

    J Bioinform Comput Biol. 2007 Dec;5(6):1233-59.

    PMID:
    18172927
    [PubMed - indexed for MEDLINE]
    10.

    Comparative analysis of five protein-protein interaction corpora.

    Pyysalo S, Airola A, Heimonen J, Björne J, Ginter F, Salakoski T.

    BMC Bioinformatics. 2008 Apr 11;9 Suppl 3:S6.

    PMID:
    18426551
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Final Report on Carcinogens Background Document for Styrene.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2008 Sep;(8-5978):i-398.

    PMID:
    20737009
    [PubMed - as supplied by publisher]
    12.

    Automatic extraction of candidate nomenclature terms using the doublet method.

    Berman JJ.

    BMC Med Inform Decis Mak. 2005 Oct 18;5:35.

    PMID:
    16232314
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    A comprehensive benchmark of kernel methods to extract protein-protein interactions from literature.

    Tikk D, Thomas P, Palaga P, Hakenberg J, Leser U.

    PLoS Comput Biol. 2010 Jul 1;6:e1000837.

    PMID:
    20617200
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    New directions in biomedical text annotation: definitions, guidelines and corpus construction.

    Wilbur WJ, Rzhetsky A, Shatkay H.

    BMC Bioinformatics. 2006 Jul 25;7:356.

    PMID:
    16867190
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Training text chunkers on a silver standard corpus: can silver replace gold?

    Kang N, van Mulligen EM, Kors JA.

    BMC Bioinformatics. 2012 Jan 30;13(1):17. [Epub ahead of print]

    PMID:
    22289351
    [PubMed - as supplied by publisher]
    Free Article
    16.

    Challenges for automatically extracting molecular interactions from full-text articles.

    McIntosh T, Curran JR.

    BMC Bioinformatics. 2009 Sep 24;10:311.

    PMID:
    19778419
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining.

    Hettne KM, Williams AJ, van Mulligen EM, Kleinjans J, Tkachenko V, Kors JA.

    J Cheminform. 2010 Mar 23;2(1):3.

    PMID:
    20331846
    [PubMed]
    Free PMC Article
    18.

    Web-based infectious disease reporting using XML forms.

    Liu D, Wang X, Pan F, Xu Y, Yang P, Rao K.

    Int J Med Inform. 2008 Sep;77(9):630-40. Epub 2007 Dec 3.

    PMID:
    18060833
    [PubMed - indexed for MEDLINE]
    19.

    The impact of the congestion charging scheme on air quality in London. Part 1. Emissions modeling and analysis of air pollution measurements.

    Kelly F, Anderson HR, Armstrong B, Atkinson R, Barratt B, Beevers S, Derwent D, Green D, Mudway I, Wilkinson P; HEI Health Review Committee.

    Res Rep Health Eff Inst. 2011 Apr;(155):5-71.

    PMID:
    21830496
    [PubMed - indexed for MEDLINE]
    20.

    All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning.

    Airola A, Pyysalo S, Björne J, Pahikkala T, Ginter F, Salakoski T.

    BMC Bioinformatics. 2008 Nov 19;9 Suppl 11:S2.

    PMID:
    19025688
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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