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    Results: 1 to 20 of 221

    1.

    The LeFE algorithm: embracing the complexity of gene expression in the interpretation of microarray data.

    Eichler GS, Reimers M, Kane D, Weinstein JN.

    Genome Biol. 2007;8(9):R187.

    PMID:
    17845722
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.

    Carter SL, Eklund AC, Mecham BH, Kohane IS, Szallasi Z.

    BMC Bioinformatics. 2005 Apr 25;6:107.

    PMID:
    15850491
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Regularized Least Squares Cancer classifiers from DNA microarray data.

    Ancona N, Maglietta R, D'Addabbo A, Liuni S, Pesole G.

    BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S2.

    PMID:
    16351746
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Cancer DNA microarray analysis considering multi-subclass with graph-based clustering method.

    Kawamura T, Mutoh H, Tomita Y, Kato R, Honda H.

    J Biosci Bioeng. 2008 Nov;106(5):442-8.

    PMID:
    19111639
    [PubMed - indexed for MEDLINE]
    Free Article
    5.

    Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation.

    Smith DD, Saetrom P, Snøve O Jr, Lundberg C, Rivas GE, Glackin C, Larson GP.

    BMC Bioinformatics. 2008 Jan 28;9:63.

    PMID:
    18226260
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Data-dependent kernel machines for microarray data classification.

    Xiong H, Zhang Y, Chen XW.

    IEEE/ACM Trans Comput Biol Bioinform. 2007 Oct-Dec;4(4):583-95.

    PMID:
    17975270
    [PubMed - indexed for MEDLINE]
    7.

    Boosting for tumor classification with gene expression data.

    Dettling M, Bühlmann P.

    Bioinformatics. 2003 Jun 12;19(9):1061-9.

    PMID:
    12801866
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    An ensemble approach for phenotype classification based on fuzzy partitioning of gene expression data.

    Dragomir A, Maraziotis I, Bezerianos A.

    Conf Proc IEEE Eng Med Biol Soc. 2006;1:5834-7.

    PMID:
    17946338
    [PubMed - indexed for MEDLINE]
    9.

    Fuzzy J-Means and VNS methods for clustering genes from microarray data.

    Belacel N, Cuperlović-Culf M, Laflamme M, Ouellette R.

    Bioinformatics. 2004 Jul 22;20(11):1690-701. Epub 2004 Feb 26.

    PMID:
    14988127
    [PubMed - indexed for MEDLINE]
    Free Article
    10.

    Discovering biclusters in gene expression data based on high-dimensional linear geometries.

    Gan X, Liew AW, Yan H.

    BMC Bioinformatics. 2008 Apr 23;9:209.

    PMID:
    18433477
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Tumor classification ranking from microarray data.

    Hewett R, Kijsanayothin P.

    BMC Genomics. 2008 Sep 16;9 Suppl 2:S21.

    PMID:
    18831787
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Multiclass classification of microarray data with repeated measurements: application to cancer.

    Yeung KY, Bumgarner RE.

    Genome Biol. 2003;4(12):R83. Epub 2003 Nov 24. Erratum in: Genome Biol. 2005;6(13):405-405.4.

    PMID:
    14659020
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Design and evaluation of Actichip, a thematic microarray for the study of the actin cytoskeleton.

    Muller J, Mehlen A, Vetter G, Yatskou M, Muller A, Chalmel F, Poch O, Friederich E, Vallar L.

    BMC Genomics. 2007 Aug 29;8:294.

    PMID:
    17727702
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    A DSRPCL-SVM approach to informative gene analysis.

    Xiong W, Cai Z, Ma J.

    Genomics Proteomics Bioinformatics. 2008 Jun;6(2):83-90.

    PMID:
    18973864
    [PubMed - indexed for MEDLINE]
    15.

    Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study.

    Shankavaram UT, Reinhold WC, Nishizuka S, Major S, Morita D, Chary KK, Reimers MA, Scherf U, Kahn A, Dolginow D, Cossman J, Kaldjian EP, Scudiero DA, Petricoin E, Liotta L, Lee JK, Weinstein JN.

    Mol Cancer Ther. 2007 Mar;6(3):820-32. Epub 2007 Mar 5.

    PMID:
    17339364
    [PubMed - indexed for MEDLINE]
    Free Article
    16.

    Coupled two-way clustering analysis of breast cancer and colon cancer gene expression data.

    Getz G, Gal H, Kela I, Notterman DA, Domany E.

    Bioinformatics. 2003 Jun 12;19(9):1079-89.

    PMID:
    12801868
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    Chaotic genetic algorithm for gene selection and classification problems.

    Chuang LY, Yang CS, Li JC, Yang CH.

    OMICS. 2009 Oct;13(5):407-20.

    PMID:
    19594377
    [PubMed - indexed for MEDLINE]
    18.

    Cancer molecular pattern discovery by subspace consensus kernel classification.

    Han X.

    Comput Syst Bioinformatics Conf. 2007;6:55-65.

    PMID:
    17951812
    [PubMed - indexed for MEDLINE]
    Free Article
    19.

    A regression-based K nearest neighbor algorithm for gene function prediction from heterogeneous data.

    Yao Z, Ruzzo WL.

    BMC Bioinformatics. 2006 Mar 20;7 Suppl 1:S11.

    PMID:
    16723004
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    High confidence rule mining for microarray analysis.

    McIntosh T, Chawla S.

    IEEE/ACM Trans Comput Biol Bioinform. 2007 Oct-Dec;4(4):611-23.

    PMID:
    17975272
    [PubMed - indexed for MEDLINE]

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