PubMed

Apollo2Go: a web service adapter for the Apollo genome viewer to enable distributed genome annotation.

Klee K, Ernst R, Spannagl M, Mayer KF.

BMC Bioinformatics. 2007 Aug 30;8:320.PMID: 17760972 [PubMed - indexed for MEDLINE]Related articlesFree article

Using Apollo to browse and edit genome annotations.

Misra S, Harris N.

Curr Protoc Bioinformatics. 2006 Jan;Chapter 9:Unit 9.5.PMID: 18428771 [PubMed - indexed for MEDLINE]Related articles

Using Chado to store genome annotation data.

Zhou P, Emmert D, Zhang P.

Curr Protoc Bioinformatics. 2006 Jan;Chapter 9:Unit 9.6.PMID: 18428772 [PubMed - indexed for MEDLINE]Related articles

CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences.

Chen X, Laudeman TW, Rushton PJ, Spraggins TA, Timko MP.

BMC Bioinformatics. 2007 Apr 19;8:129.PMID: 17445272 [PubMed - indexed for MEDLINE]Related articlesFree article

Automatic annotation of organellar genomes with DOGMA.

Wyman SK, Jansen RK, Boore JL.

Bioinformatics. 2004 Nov 22;20(17):3252-5. Epub 2004 Jun 4.PMID: 15180927 [PubMed - indexed for MEDLINE]Related articlesFree article

Statistical Viewer: a tool to upload and integrate linkage and association data as plots displayed within the Ensembl genome browser.

Stenger JE, Xu H, Haynes C, Hauser ER, Pericak-Vance M, Goldschmidt-Clermont PJ, Vance JM.

BMC Bioinformatics. 2005 Apr 12;6:95.PMID: 15826305 [PubMed - indexed for MEDLINE]Related articlesFree article

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.PMID: 17062145 [PubMed - indexed for MEDLINE]Related articlesFree article

G-InforBIO: integrated system for microbial genomics.

Tanaka N, Abe T, Miyazaki S, Sugawara H.

BMC Bioinformatics. 2006 Aug 4;7:368.PMID: 16887044 [PubMed - indexed for MEDLINE]Related articlesFree article

An extensible application for assembling annotation for genomic data.

Zhang J, Carey V, Gentleman R.

Bioinformatics. 2003 Jan;19(1):155-6.PMID: 12499308 [PubMed - indexed for MEDLINE]Related articlesFree article

Genquire: genome annotation browser/editor.

Wilkinson MD, Block D, Crosby WL.

Bioinformatics. 2002 Oct;18(10):1398-9.PMID: 12376386 [PubMed - indexed for MEDLINE]Related articlesFree article

PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results.

He J, Dai X, Zhao X.

BMC Bioinformatics. 2007 Feb 9;8:53.PMID: 17291345 [PubMed - indexed for MEDLINE]Related articlesFree article

GeneCruiser: a web service for the annotation of microarray data.

Liefeld T, Reich M, Gould J, Zhang P, Tamayo P, Mesirov JP.

Bioinformatics. 2005 Sep 15;21(18):3681-2. Epub 2005 Jul 19.PMID: 16030072 [PubMed - indexed for MEDLINE]Related articlesFree article

annot8r: GO, EC and KEGG annotation of EST datasets.

Schmid R, Blaxter ML.

BMC Bioinformatics. 2008 Apr 9;9:180.PMID: 18400082 [PubMed - indexed for MEDLINE]Related articlesFree article

Visualization for genomics: the Microbial Genome Viewer.

Kerkhoven R, van Enckevort FH, Boekhorst J, Molenaar D, Siezen RJ.

Bioinformatics. 2004 Jul 22;20(11):1812-4. Epub 2004 Feb 26.PMID: 14988111 [PubMed - indexed for MEDLINE]Related articlesFree article

Using the Ensembl genome server to browse genomic sequence data.

Fernández-Suárez XM, Schuster MK.

Curr Protoc Bioinformatics. 2007 Jan;Chapter 1:Unit 1.15.PMID: 18428779 [PubMed - indexed for MEDLINE]Related articles

Genomic data visualization on the Web.

Wu W, Noble WS.

Bioinformatics. 2004 Jul 22;20(11):1804-5. Epub 2004 Feb 26.PMID: 14988106 [PubMed - indexed for MEDLINE]Related articlesFree article

SNPit: a federated data integration system for the purpose of functional SNP annotation.

Shen TH, Carlson CS, Tarczy-Hornoch P.

Comput Methods Programs Biomed. 2009 Aug;95(2):181-9. Epub 2009 Mar 26.PMID: 19327864 [PubMed - indexed for MEDLINE]Related articles

Apollo: a community resource for genome annotation editing.

Ed L, Nomi H, Mark G, Raymond C, Suzanna L.

Bioinformatics. 2009 Jul 15;25(14):1836-7. Epub 2009 May 13.PMID: 19439563 [PubMed - indexed for MEDLINE]Related articlesFree article

CAAT-Box, Contigs-Assembly and Annotation Tool-Box for genome sequencing projects.

Frangeul L, Glaser P, Rusniok C, Buchrieser C, Duchaud E, Dehoux P, Kunst F.

Bioinformatics. 2004 Mar 22;20(5):790-7. Epub 2004 Jan 29.PMID: 14752000 [PubMed - indexed for MEDLINE]Related articlesFree article

Using the NCBI Map Viewer to browse genomic sequence data.

Wolfsberg TG.

Curr Protoc Bioinformatics. 2007 Jan;Chapter 1:Unit 1.5.PMID: 18428781 [PubMed - indexed for MEDLINE]Related articles