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The Biological Big Bang model for the major transitions in evolution.

Koonin EV.

Biol Direct. 2007 Aug 20;2:21.PMID: 17708768 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

The ancient Virus World and evolution of cells.

Koonin EV, Senkevich TG, Dolja VV.

Biol Direct. 2006 Sep 19;1:29.PMID: 16984643 [PubMed]Free PMC ArticleFree textRelated citations

Temporal order of evolution of DNA replication systems inferred by comparison of cellular and viral DNA polymerases.

Koonin EV.

Biol Direct. 2006 Dec 18;1:39.PMID: 17176463 [PubMed]Free PMC ArticleFree textRelated citations

The cosmological model of eternal inflation and the transition from chance to biological evolution in the history of life.

Koonin EV.

Biol Direct. 2007 May 31;2:15.PMID: 17540027 [PubMed]Free PMC ArticleFree textRelated citations

Search for a 'Tree of Life' in the thicket of the phylogenetic forest.

Puigbò P, Wolf YI, Koonin EV.

J Biol. 2009;8(6):59. Epub 2009 Jul 13.PMID: 19594957 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

The last universal common ancestor: emergence, constitution and genetic legacy of an elusive forerunner.

Glansdorff N, Xu Y, Labedan B.

Biol Direct. 2008 Jul 9;3:29. Review.PMID: 18613974 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

The origin of introns and their role in eukaryogenesis: a compromise solution to the introns-early versus introns-late debate?

Koonin EV.

Biol Direct. 2006 Aug 14;1:22.PMID: 16907971 [PubMed]Free PMC ArticleFree textRelated citations

Evolution of gene fusions: horizontal transfer versus independent events.

Yanai I, Wolf YI, Koonin EV.

Genome Biol. 2002;3(5):research0024. Epub 2002 Apr 26.PMID: 12049665 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification.

Cavalier-Smith T.

Int J Syst Evol Microbiol. 2002 Jan;52(Pt 1):7-76. Review.PMID: 11837318 [PubMed - indexed for MEDLINE]Free ArticleRelated citations

On the origins of cells: a hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells.

Martin W, Russell MJ.

Philos Trans R Soc Lond B Biol Sci. 2003 Jan 29;358(1429):59-83; discussion 83-5.PMID: 12594918 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

The fundamental units, processes and patterns of evolution, and the tree of life conundrum.

Koonin EV, Wolf YI.

Biol Direct. 2009 Sep 29;4:33.PMID: 19788730 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

[Foundations of the new phylogenetics]

Pavlinov IIa.

Zh Obshch Biol. 2004 Jul-Aug;65(4):334-66. Russian. PMID: 15490579 [PubMed - indexed for MEDLINE]Related citations

On the origin of cells and viruses: primordial virus world scenario.

Koonin EV.

Ann N Y Acad Sci. 2009 Oct;1178:47-64.PMID: 19845627 [PubMed - indexed for MEDLINE]Related citations

The path from the RNA world.

Poole AM, Jeffares DC, Penny D.

J Mol Evol. 1998 Jan;46(1):1-17. Review.PMID: 9419221 [PubMed - indexed for MEDLINE]Related citations

Evolutionary genomics of nucleo-cytoplasmic large DNA viruses.

Iyer LM, Balaji S, Koonin EV, Aravind L.

Virus Res. 2006 Apr;117(1):156-84. Epub 2006 Feb 21. Review.PMID: 16494962 [PubMed - indexed for MEDLINE]Related citations

The natural evolutionary relationships among prokaryotes.

Gupta RS.

Crit Rev Microbiol. 2000;26(2):111-31. Review.PMID: 10890353 [PubMed - indexed for MEDLINE]Related citations

Evolution of mosaic operons by horizontal gene transfer and gene displacement in situ.

Omelchenko MV, Makarova KS, Wolf YI, Rogozin IB, Koonin EV.

Genome Biol. 2003;4(9):R55. Epub 2003 Aug 29.PMID: 12952534 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories.

Aravind L, Makarova KS, Koonin EV.

Nucleic Acids Res. 2000 Sep 15;28(18):3417-32.PMID: 10982859 [PubMed - indexed for MEDLINE]Free PMC ArticleFree textRelated citations

The Big Bang of picorna-like virus evolution antedates the radiation of eukaryotic supergroups.

Koonin EV, Wolf YI, Nagasaki K, Dolja VV.

Nat Rev Microbiol. 2008 Dec;6(12):925-39. Epub 2008 Nov 10. Review.PMID: 18997823 [PubMed - indexed for MEDLINE]Related citations

Birth of the domains Bacteria, Archaea and Eucarya and of major taxa within them: a hypothesis.

Zorzopulos J.

Rev Argent Microbiol. 2003 Oct-Dec;35(4):175-82. Review.PMID: 14976868 [PubMed - indexed for MEDLINE]Related citations