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    Results: 1 to 20 of 115

    1.

    Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes.

    Baart GJ, Zomer B, de Haan A, van der Pol LA, Beuvery EC, Tramper J, Martens DE.

    Genome Biol. 2007;8(7):R136.

    PMID:
    17617894
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Modeling Neisseria meningitidis B metabolism at different specific growth rates.

    Baart GJ, Willemsen M, Khatami E, de Haan A, Zomer B, Beuvery EC, Tramper J, Martens DE.

    Biotechnol Bioeng. 2008 Dec 1;101(5):1022-35.

    PMID:
    18942773
    [PubMed - indexed for MEDLINE]
    3.

    Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns.

    Kaleta C, de Figueiredo LF, Schuster S.

    Genome Res. 2009 Oct;19(10):1872-83. Epub 2009 Jun 18.

    PMID:
    19541909
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Comparative genomics of Neisseria meningitidis: core genome, islands of horizontal transfer and pathogen-specific genes.

    Dunning Hotopp JC, Grifantini R, Kumar N, Tzeng YL, Fouts D, Frigimelica E, Draghi M, Giuliani MM, Rappuoli R, Stephens DS, Grandi G, Tettelin H.

    Microbiology. 2006 Dec;152(Pt 12):3733-49.

    PMID:
    17159225
    [PubMed - indexed for MEDLINE]
    Free Article
    5.

    Genome-scale reconstruction and in silico analysis of the Clostridium acetobutylicum ATCC 824 metabolic network.

    Lee J, Yun H, Feist AM, Palsson BØ, Lee SY.

    Appl Microbiol Biotechnol. 2008 Oct;80(5):849-62. Epub 2008 Aug 29.

    PMID:
    18758767
    [PubMed - indexed for MEDLINE]
    6.

    Modeling Lactococcus lactis using a genome-scale flux model.

    Oliveira AP, Nielsen J, Förster J.

    BMC Microbiol. 2005 Jun 27;5:39.

    PMID:
    15982422
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Genome-scale model for Clostridium acetobutylicum: Part II. Development of specific proton flux states and numerically determined sub-systems.

    Senger RS, Papoutsakis ET.

    Biotechnol Bioeng. 2008 Dec 1;101(5):1053-71.

    PMID:
    18767191
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Genome-scale analysis of Mannheimia succiniciproducens metabolism.

    Kim TY, Kim HU, Park JM, Song H, Kim JS, Lee SY.

    Biotechnol Bioeng. 2007 Jul 1;97(4):657-71.

    PMID:
    17405177
    [PubMed - indexed for MEDLINE]
    9.

    Final Report on Carcinogens Background Document for Formaldehyde.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2010 Jan;(10-5981):i-512.

    PMID:
    20737003
    [PubMed - as supplied by publisher]
    10.

    Expression of phosphofructokinase in Neisseria meningitidis.

    Baart GJ, Langenhof M, van de Waterbeemd B, Hamstra HJ, Zomer B, van der Pol LA, Beuvery EC, Tramper J, Martens DE.

    Microbiology. 2010 Feb;156(Pt 2):530-42. Epub 2009 Oct 1.

    PMID:
    19797358
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1.

    Oberhardt MA, Puchałka J, Fryer KE, Martins dos Santos VA, Papin JA.

    J Bacteriol. 2008 Apr;190(8):2790-803. Epub 2008 Jan 11.

    PMID:
    18192387
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Microaerobic denitrification in Neisseria meningitidis.

    Rock JD, Moir JW.

    Biochem Soc Trans. 2005 Feb;33(Pt 1):134-6.

    PMID:
    15667285
    [PubMed - indexed for MEDLINE]
    13.

    The pathogen Neisseria meningitidis requires oxygen, but supplements growth by denitrification. Nitrite, nitric oxide and oxygen control respiratory flux at genetic and metabolic levels.

    Rock JD, Mahnane MR, Anjum MF, Shaw JG, Read RC, Moir JW.

    Mol Microbiol. 2005 Nov;58(3):800-9.

    PMID:
    16238628
    [PubMed - indexed for MEDLINE]
    14.

    Genome-scale models of bacterial metabolism: reconstruction and applications.

    Durot M, Bourguignon PY, Schachter V.

    FEMS Microbiol Rev. 2009 Jan;33(1):164-90. Epub 2008 Dec 3. Review.

    PMID:
    19067749
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Genome-scale metabolic networks.

    Terzer M, Maynard ND, Covert MW, Stelling J.

    Wiley Interdiscip Rev Syst Biol Med. 2009 Nov-Dec;1(3):285-97. Review.

    PMID:
    20835998
    [PubMed - indexed for MEDLINE]
    16.

    A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory.

    Nogales J, Palsson BØ, Thiele I.

    BMC Syst Biol. 2008 Sep 16;2:79.

    PMID:
    18793442
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Metabolic investigation of host/pathogen interaction using MS2-infected Escherichia coli.

    Jain R, Srivastava R.

    BMC Syst Biol. 2009 Dec 30;3:121.

    PMID:
    20042079
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Genome analysis and strain comparison of correia repeats and correia repeat-enclosed elements in pathogenic Neisseria.

    Liu SV, Saunders NJ, Jeffries A, Rest RF.

    J Bacteriol. 2002 Nov;184(22):6163-73.

    PMID:
    12399486
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    Genome-scale modeling and in silico analysis of mouse cell metabolic network.

    Selvarasu S, Karimi IA, Ghim GH, Lee DY.

    Mol Biosyst. 2010 Jan;6(1):152-61. Epub 2009 Sep 2.

    PMID:
    20024077
    [PubMed - indexed for MEDLINE]
    20.

    Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production.

    Colijn C, Brandes A, Zucker J, Lun DS, Weiner B, Farhat MR, Cheng TY, Moody DB, Murray M, Galagan JE.

    PLoS Comput Biol. 2009 Aug;5(8):e1000489. Epub 2009 Aug 28.

    PMID:
    19714220
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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