Warning: The NCBI web site requires JavaScript to function. more...
Topological variation in single-gene phylogenetic trees.
Castresana J.
Genome Biol. 2007;8(6):216. Review.
Related citations
FUNYBASE: a FUNgal phYlogenomic dataBASE.
Marthey S, Aguileta G, Rodolphe F, Gendrault A, Giraud T, Fournier E, Lopez-Villavicencio M, Gautier A, Lebrun MH, Chiapello H.
BMC Bioinformatics. 2008 Oct 27;9:456.
Automatic genome-wide reconstruction of phylogenetic gene trees.
Wapinski I, Pfeffer A, Friedman N, Regev A.
Bioinformatics. 2007 Jul 1;23(13):i549-58.
Rooting the eutherian tree: the power and pitfalls of phylogenomics.
Nishihara H, Okada N, Hasegawa M.
Genome Biol. 2007;8(9):R199.
Drawing the tree of eukaryotic life based on the analysis of 2,269 manually annotated myosins from 328 species.
Odronitz F, Kollmar M.
Genome Biol. 2007;8(9):R196.
Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes.
Rasmussen MD, Kellis M.
Genome Res. 2007 Dec;17(12):1932-42. Epub 2007 Nov 7.
Uncovering rate variation of lateral gene transfer during bacterial genome evolution.
Hao W, Golding GB.
BMC Genomics. 2008 May 20;9:235. Erratum in: BMC Genomics. 2008(9):556.
Extensive horizontal transfer of core genome genes between two Lactobacillus species found in the gastrointestinal tract.
Nicolas P, Bessières P, Ehrlich SD, Maguin E, van de Guchte M.
BMC Evol Biol. 2007 Aug 20;7:141.
Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera).
Hua J, Li M, Dong P, Cui Y, Xie Q, Bu W.
BMC Genomics. 2008 Dec 17;9:610.
A novel feature-based method for whole genome phylogenetic analysis without alignment: application to HEV genotyping and subtyping.
Liu Z, Meng J, Sun X.
Biochem Biophys Res Commun. 2008 Apr 4;368(2):223-30. Epub 2008 Jan 28.
The impact of reticulate evolution on genome phylogeny.
Beiko RG, Doolittle WF, Charlebois RL.
Syst Biol. 2008 Dec;57(6):844-56.
Supertrees and symbiosis in eukaryote genome evolution.
Esser C, Martin W.
Trends Microbiol. 2007 Oct;15(10):435-7. Epub 2007 Sep 19.
A preliminary mitochondrial genome phylogeny of Orthoptera (Insecta) and approaches to maximizing phylogenetic signal found within mitochondrial genome data.
Fenn JD, Song H, Cameron SL, Whiting MF.
Mol Phylogenet Evol. 2008 Oct;49(1):59-68. Epub 2008 Jul 15.
A human genome-wide library of local phylogeny predictions for whole-genome inference problems.
Sridhar S, Schwartz R.
BMC Genomics. 2008 Aug 18;9:389.
Saturation and base composition bias explain phylogenomic conflict in Plasmodium.
Dávalos LM, Perkins SL.
Genomics. 2008 May;91(5):433-42. Epub 2008 Mar 4.
Reconstructing the phylogenetic relationships of the earth's most diverse clade of freshwater fishes--order Cypriniformes (Actinopterygii: Ostariophysi): a case study using multiple nuclear loci and the mitochondrial genome.
Mayden RL, Chen WJ, Bart HL, Doosey MH, Simons AM, Tang KL, Wood RM, Agnew MK, Yang L, Hirt MV, Clements MD, Saitoh K, Sado T, Miya M, Nishida M.
Mol Phylogenet Evol. 2009 Jun;51(3):500-14. Epub 2008 Dec 25.
The impact of outgroup choice and missing data on major seed plant phylogenetics using genome-wide EST data.
de la Torre-Bárcena JE, Kolokotronis SO, Lee EK, Stevenson DW, Brenner ED, Katari MS, Coruzzi GM, DeSalle R.
PLoS One. 2009 Jun 2;4(6):e5764.
Evolution of C2H2-zinc finger genes and subfamilies in mammals: species-specific duplication and loss of clusters, genes and effector domains.
Tadepally HD, Burger G, Aubry M.
BMC Evol Biol. 2008 Jun 18;8:176.
PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas.
Moustafa A, Bhattacharya D.
BMC Evol Biol. 2008 Jan 15;8:6.
Estimation of phylogenetic inconsistencies in the three domains of life.
Soria-Carrasco V, Castresana J.
Mol Biol Evol. 2008 Nov;25(11):2319-29. Epub 2008 Aug 12.
Filter your results:
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on