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    Results: 1 to 20 of 80

    1.

    Towards the uniform distribution of null P values on Affymetrix microarrays.

    Fodor AA, Tickle TL, Richardson C.

    Genome Biol. 2007;8(5):R69.

    PMID:
    17472745
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Filtering for increased power for microarray data analysis.

    Hackstadt AJ, Hess AM.

    BMC Bioinformatics. 2009 Jan 8;10:11.

    PMID:
    19133141
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    A unified framework for finding differentially expressed genes from microarray experiments.

    Shaik JS, Yeasin M.

    BMC Bioinformatics. 2007 Sep 18;8:347.

    PMID:
    17877806
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Methods for evaluating gene expression from Affymetrix microarray datasets.

    Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.

    BMC Bioinformatics. 2008 Jun 17;9:284.

    PMID:
    18559105
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Comparison of small n statistical tests of differential expression applied to microarrays.

    Murie C, Woody O, Lee AY, Nadon R.

    BMC Bioinformatics. 2009 Feb 3;10:45.

    PMID:
    19192265
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    [Comparison of statistical methods for detecting differential expression in microarray data].

    Shan WJ, Tong CF, Shi JS.

    Yi Chuan. 2008 Dec;30(12):1640-6. Chinese.

    PMID:
    19073583
    [PubMed - indexed for MEDLINE]
    7.

    Revisiting adverse effects of cross-hybridization in Affymetrix gene expression data: do they matter for correlation analysis?

    Klebanov L, Chen L, Yakovlev A.

    Biol Direct. 2007 Nov 7;2:28.

    PMID:
    17988401
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Bioinformatics tools enabling u-statistics for microarrays.

    Wittkowski KM, Haider A, Sehayek E, Suárez-Fariñas M, Pellegrino M, Peshansky A, Coffran C, Coker S.

    Conf Proc IEEE Eng Med Biol Soc. 2006;1:3464-9.

    PMID:
    17947031
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Determining gene expression on a single pair of microarrays.

    Reid RW, Fodor AA.

    BMC Bioinformatics. 2008 Nov 21;9:489.

    PMID:
    19025600
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Conservative adjustment of permutation p-values when the number of permutations is limited.

    Lai Y.

    Int J Bioinform Res Appl. 2007;3(4):536-46.

    PMID:
    18048318
    [PubMed - indexed for MEDLINE]
    12.

    Ranking analysis of F-statistics for microarray data.

    Tan YD, Fornage M, Xu H.

    BMC Bioinformatics. 2008 Mar 6;9:142.

    PMID:
    18325100
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Microarray data analysis and mining approaches.

    Cordero F, Botta M, Calogero RA.

    Brief Funct Genomic Proteomic. 2007 Dec;6(4):265-81. Epub 2008 Jan 22. Review.

    PMID:
    18216026
    [PubMed - indexed for MEDLINE]
    Free Article
    14.

    CrossHybDetector: detection of cross-hybridization events in DNA microarray experiments.

    Uva P, de Rinaldis E.

    BMC Bioinformatics. 2008 Nov 17;9:485.

    PMID:
    19014642
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Estimating the false discovery rate using nonparametric deconvolution.

    van de Wiel MA, Kim KI.

    Biometrics. 2007 Sep;63(3):806-15.

    PMID:
    17825012
    [PubMed - indexed for MEDLINE]
    16.

    Approaches to reduce false positives and false negatives in the analysis of microarray data: applications in type 1 diabetes research.

    Wu J, Lenchik NI, Gerling IC.

    BMC Genomics. 2008 Sep 16;9 Suppl 2:S12.

    PMID:
    18831777
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data.

    Chen JJ, Hsueh HM, Delongchamp RR, Lin CJ, Tsai CA.

    BMC Bioinformatics. 2007 Oct 25;8:412.

    PMID:
    17961233
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    18.

    Comparison of Affymetrix data normalization methods using 6,926 experiments across five array generations.

    Autio R, Kilpinen S, Saarela M, Kallioniemi O, Hautaniemi S, Astola J.

    BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S24.

    PMID:
    19208124
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    A new outlier removal approach for cDNA microarray normalization.

    Wu Y, Yan L, Liu H, Sun H, Xie H.

    Biotechniques. 2009 Aug;47(2):691-2, 694-700.

    PMID:
    19737130
    [PubMed - indexed for MEDLINE]
    Free Article
    20.

    A class comparison method with filtering-enhanced variable selection for high-dimensional data sets.

    Lusa L, Korn EL, McShane LM.

    Stat Med. 2008 Dec 10;27(28):5834-49.

    PMID:
    18781559
    [PubMed - indexed for MEDLINE]

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