PubMed

Expression genomics in breast cancer research: microarrays at the crossroads of biology and medicine.

Miller LD, Liu ET.

Breast Cancer Res. 2007;9(2):206. Review.PMID: 17397520 [PubMed - indexed for MEDLINE]Related articlesFree article

An integration of complementary strategies for gene-expression analysis to reveal novel therapeutic opportunities for breast cancer.

Bild AH, Parker JS, Gustafson AM, Acharya CR, Hoadley KA, Anders C, Marcom PK, Carey LA, Potti A, Nevins JR, Perou CM.

Breast Cancer Res. 2009;11(4):R55. Epub 2009 Jul 28.PMID: 19638211 [PubMed - indexed for MEDLINE]Related articlesFree article

Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation.

Smith DD, Saetrom P, Snøve O Jr, Lundberg C, Rivas GE, Glackin C, Larson GP.

BMC Bioinformatics. 2008 Jan 28;9:63.PMID: 18226260 [PubMed - indexed for MEDLINE]Related articlesFree article

Meta-analysis and gene set enrichment relative to er status reveal elevated activity of MYC and E2F in the "basal" breast cancer subgroup.

Alles MC, Gardiner-Garden M, Nott DJ, Wang Y, Foekens JA, Sutherland RL, Musgrove EA, Ormandy CJ.

PLoS One. 2009;4(3):e4710. Epub 2009 Mar 9.PMID: 19270750 [PubMed - indexed for MEDLINE]Related articlesFree article

[DNA microarrays for gene expression profiling of breast cancer: principles and prognostic applications]

Bertucci F, Viens P, Birnbaum D.

Pathol Biol (Paris). 2006 Feb;54(1):49-54. French. PMID: 16376179 [PubMed - indexed for MEDLINE]Related articles

Cross-study projections of genomic biomarkers: an evaluation in cancer genomics.

Lucas JE, Carvalho CM, Chen JL, Chi JT, West M.

PLoS One. 2009;4(2):e4523. Epub 2009 Feb 19.PMID: 19225561 [PubMed - indexed for MEDLINE]Related articlesFree article

Characterizing disease states from topological properties of transcriptional regulatory networks.

Tuck DP, Kluger HM, Kluger Y.

BMC Bioinformatics. 2006 May 2;7:236.PMID: 16670008 [PubMed - indexed for MEDLINE]Related articlesFree article

Elucidating the altered transcriptional programs in breast cancer using independent component analysis.

Teschendorff AE, Journée M, Absil PA, Sepulchre R, Caldas C.

PLoS Comput Biol. 2007 Aug;3(8):e161. Epub 2007 Jun 29.PMID: 17708679 [PubMed - indexed for MEDLINE]Related articlesFree article

Microarrays in breast cancer research and clinical practice--the future lies ahead.

Gruvberger-Saal SK, Cunliffe HE, Carr KM, Hedenfalk IA.

Endocr Relat Cancer. 2006 Dec;13(4):1017-31. Review.PMID: 17158752 [PubMed - indexed for MEDLINE]Related articlesFree article

Improved breast cancer prognosis through the combination of clinical and genetic markers.

Sun Y, Goodison S, Li J, Liu L, Farmerie W.

Bioinformatics. 2007 Jan 1;23(1):30-7. Epub 2006 Nov 26.PMID: 17130137 [PubMed - indexed for MEDLINE]Related articlesFree article

Epigenetic mapping and functional analysis in a breast cancer metastasis model using whole-genome promoter tiling microarrays.

Rodenhiser DI, Andrews J, Kennette W, Sadikovic B, Mendlowitz A, Tuck AB, Chambers AF.

Breast Cancer Res. 2008;10(4):R62. Epub 2008 Jul 18.PMID: 18638373 [PubMed - indexed for MEDLINE]Related articlesFree article

Aging impacts transcriptomes but not genomes of hormone-dependent breast cancers.

Yau C, Fedele V, Roydasgupta R, Fridlyand J, Hubbard A, Gray JW, Chew K, Dairkee SH, Moore DH, Schittulli F, Tommasi S, Paradiso A, Albertson DG, Benz CC.

Breast Cancer Res. 2007;9(5):R59.PMID: 17850661 [PubMed - indexed for MEDLINE]Related articlesFree article

Genomics-based prognosis and therapeutic prediction in breast cancer.

Jeffrey SS, Lønning PE, Hillner BE.

J Natl Compr Canc Netw. 2005 May;3(3):291-300. Review.PMID: 16002001 [PubMed - indexed for MEDLINE]Related articles

Multiple biomarkers in molecular oncology. II. Molecular diagnostics applications in breast cancer management.

Malinowski DP.

Expert Rev Mol Diagn. 2007 May;7(3):269-80. Review.PMID: 17489734 [PubMed - indexed for MEDLINE]Related articles

Integrating biological knowledge with gene expression profiles for survival prediction of cancer.

Chen X, Wang L.

J Comput Biol. 2009 Feb;16(2):265-78.PMID: 19183004 [PubMed - indexed for MEDLINE]Related articles

Where are we in genomics?

Hocquette JF.

J Physiol Pharmacol. 2005 Jun;56 Suppl 3:37-70. Review.PMID: 16077195 [PubMed - indexed for MEDLINE]Related articlesFree article

Genomics and circulating tumor cells: promising tools for choosing and monitoring adjuvant therapy in patients with early breast cancer?

Dirix L, Van Dam P, Vermeulen P.

Curr Opin Oncol. 2005 Nov;17(6):551-8. Review.PMID: 16224232 [PubMed - indexed for MEDLINE]Related articles

Molecular profiling of breast cancer: transcriptomic studies and beyond.

Culhane AC, Howlin J.

Cell Mol Life Sci. 2007 Dec;64(24):3185-200. Review.PMID: 17957338 [PubMed - indexed for MEDLINE]Related articles

Integrated gene expression profile predicts prognosis of breast cancer patients.

Li LF, Xu XJ, Zhao Y, Liu ZB, Shen ZZ, Jin WR, Shao ZM.

Breast Cancer Res Treat. 2009 Jan;113(2):231-7. Epub 2008 Feb 16.PMID: 18278552 [PubMed - indexed for MEDLINE]Related articles

SELDI-TOF proteomic profiling of breast carcinomas identifies clinicopathologically relevant groups of patients similar to previously defined clusters from cDNA expression.

Zeidan BA, Townsend PA.

Breast Cancer Res. 2008;10(3):107.PMID: 18644101 [PubMed - indexed for MEDLINE]Related articlesFree article