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    Results: 1 to 20 of 103

    1.

    ImmTree: database of evolutionary relationships of genes and proteins in the human immune system.

    Ortutay C, Siermala M, Vihinen M.

    Immunome Res. 2007 Mar 21;3:4.

    PMID:
    17376226
    [PubMed]
    Free PMC Article
    2.

    An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases.

    Yang JO, Hwang S, Oh J, Bhak J, Sohn TK.

    BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S19.

    PMID:
    19091018
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees.

    Matsuya A, Sakate R, Kawahara Y, Koyanagi KO, Sato Y, Fujii Y, Yamasaki C, Habara T, Nakaoka H, Todokoro F, Yamaguchi K, Endo T, Oota S, Makalowski W, Ikeo K, Suzuki Y, Hanada K, Hashimoto K, Hirai M, Iwama H, Saitou N, Hiraki AT, Jin L, Kaneko Y, Kanno M, Murakami K, Noda AO, Saichi N, Sanbonmatsu R, Suzuki M, Takeda J, Tanaka M, Gojobori T, Imanishi T, Itoh T.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D787-92. Epub 2007 Nov 3.

    PMID:
    17982176
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Immunome knowledge base (IKB): an integrated service for immunome research.

    Ortutay C, Vihinen M.

    BMC Immunol. 2009 Jan 9;10:3.

    PMID:
    19134210
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    Immunity genes and their orthologs: a multi-species database.

    Rannikko K, Ortutay C, Vihinen M.

    Int Immunol. 2007 Dec;19(12):1361-70. Epub 2007 Oct 27.

    PMID:
    17965450
    [PubMed - indexed for MEDLINE]
    Free Article
    6.

    FUNYBASE: a FUNgal phYlogenomic dataBASE.

    Marthey S, Aguileta G, Rodolphe F, Gendrault A, Giraud T, Fournier E, Lopez-Villavicencio M, Gautier A, Lebrun MH, Chiapello H.

    BMC Bioinformatics. 2008 Oct 27;9:456.

    PMID:
    18954438
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Immunome: a reference set of genes and proteins for systems biology of the human immune system.

    Ortutay C, Vihinen M.

    Cell Immunol. 2006 Dec;244(2):87-9. Epub 2007 Apr 16.

    PMID:
    17434156
    [PubMed - indexed for MEDLINE]
    8.

    The Innate Immune Database (IIDB).

    Korb M, Rust AG, Thorsson V, Battail C, Li B, Hwang D, Kennedy KA, Roach JC, Rosenberger CM, Gilchrist M, Zak D, Johnson C, Marzolf B, Aderem A, Shmulevich I, Bolouri H.

    BMC Immunol. 2008 Mar 5;9:7.

    PMID:
    18321385
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    p53FamTaG: a database resource of human p53, p63 and p73 direct target genes combining in silico prediction and microarray data.

    Sbisà E, Catalano D, Grillo G, Licciulli F, Turi A, Liuni S, Pesole G, De Grassi A, Caratozzolo MF, D'Erchia AM, Navarro B, Tullo A, Saccone C, Gisel A.

    BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S20.

    PMID:
    17430565
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    HAPPI: an online database of comprehensive human annotated and predicted protein interactions.

    Chen JY, Mamidipalli S, Huan T.

    BMC Genomics. 2009 Jul 7;10 Suppl 1:S16.

    PMID:
    19594875
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    TOBFAC: the database of tobacco transcription factors.

    Rushton PJ, Bokowiec MT, Laudeman TW, Brannock JF, Chen X, Timko MP.

    BMC Bioinformatics. 2008 Jan 25;9:53.

    PMID:
    18221524
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Molecular characterization of the immune system: emergence of proteins, processes, and domains.

    Ortutay C, Siermala M, Vihinen M.

    Immunogenetics. 2007 May;59(5):333-48. Epub 2007 Feb 9.

    PMID:
    17294181
    [PubMed - indexed for MEDLINE]
    13.

    HEG-DB: a database of predicted highly expressed genes in prokaryotic complete genomes under translational selection.

    Puigbò P, Romeu A, Garcia-Vallvé S.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D524-7. Epub 2007 Oct 11.

    PMID:
    17933767
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    DNA microarray data integration by ortholog gene analysis reveals potential molecular mechanisms of estrogen-dependent growth of human uterine fibroids.

    Wei T, Geiser AG, Qian HR, Su C, Helvering LM, Kulkarini NH, Shou J, N'Cho M, Bryant HU, Onyia JE.

    BMC Womens Health. 2007 Apr 2;7:5.

    PMID:
    17407572
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    15.

    Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets.

    Chelala C, Hahn SA, Whiteman HJ, Barry S, Hariharan D, Radon TP, Lemoine NR, Crnogorac-Jurcevic T.

    BMC Genomics. 2007 Nov 28;8:439.

    PMID:
    18045474
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    CentrosomeDB: a human centrosomal proteins database.

    Nogales-Cadenas R, Abascal F, Díez-Pérez J, Carazo JM, Pascual-Montano A.

    Nucleic Acids Res. 2009 Jan;37(Database issue):D175-80. Epub 2008 Oct 29.

    PMID:
    18971254
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    MSOAR: a high-throughput ortholog assignment system based on genome rearrangement.

    Fu Z, Chen X, Vacic V, Nan P, Zhong Y, Jiang T.

    J Comput Biol. 2007 Nov;14(9):1160-75.

    PMID:
    17990975
    [PubMed - indexed for MEDLINE]
    18.

    PseudoGeneQuest - service for identification of different pseudogene types in the human genome.

    Ortutay C, Vihinen M.

    BMC Bioinformatics. 2008 Jul 2;9:299.

    PMID:
    18597685
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites.

    Hummel J, Niemann M, Wienkoop S, Schulze W, Steinhauser D, Selbig J, Walther D, Weckwerth W.

    BMC Bioinformatics. 2007 Jun 23;8:216.

    PMID:
    17587460
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks.

    Baumbach J.

    BMC Bioinformatics. 2007 Nov 6;8:429.

    PMID:
    17986320
    [PubMed - indexed for MEDLINE]
    Free PMC Article

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