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    Results: 1 to 20 of 531

    1.

    Rapid divergence of codon usage patterns within the rice genome.

    Wang HC, Hickey DA.

    BMC Evol Biol. 2007 Feb 8;7 Suppl 1:S6.PMID: 17288579 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Gender-specific selection on codon usage in plant genomes.

    Whittle CA, Malik MR, Krochko JE.

    BMC Genomics. 2007 Jun 13;8:169.PMID: 17567911 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    Differential selective constraints shaping codon usage pattern of housekeeping and tissue-specific homologous genes of rice and arabidopsis.

    Mukhopadhyay P, Basak S, Ghosh TC.

    DNA Res. 2008 Dec;15(6):347-56. Epub 2008 Sep 30.PMID: 18827062 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    [Synonymous codon usage bias in the rice cultivar 93-11 (Oryza sativa L. ssp. indica)]

    Liu QP, Tan J, Xue QZ.

    Yi Chuan Xue Bao. 2003 Apr;30(4):335-40. Chinese. PMID: 12812058 [PubMed - indexed for MEDLINE]Related articles

    5.

    Mutational bias affects protein evolution in flowering plants.

    Wang HC, Singer GA, Hickey DA.

    Mol Biol Evol. 2004 Jan;21(1):90-6. Epub 2003 Oct 31.PMID: 14595101 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Nucleotide substitution pattern in rice paralogues: implication for negative correlation between the synonymous substitution rate and codon usage bias.

    Shi X, Wang X, Li Z, Zhu Q, Tang W, Ge S, Luo J.

    Gene. 2006 Jul 19;376(2):199-206. Epub 2006 Mar 18.PMID: 16644142 [PubMed - indexed for MEDLINE]Related articles

    7.

    Developmental stage related patterns of codon usage and genomic GC content: searching for evolutionary fingerprints with models of stem cell differentiation.

    Ren L, Gao G, Zhao D, Ding M, Luo J, Deng H.

    Genome Biol. 2007;8(3):R35.PMID: 17349061 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Comparative studies on codon usage pattern of chloroplasts and their host nuclear genes in four plant species.

    Liu Q, Xue Q.

    J Genet. 2005 Apr;84(1):55-62.PMID: 15876584 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Codon usage in highly expressed genes of Haemophillus influenzae and Mycobacterium tuberculosis: translational selection versus mutational bias.

    Pan A, Dutta C, Das J.

    Gene. 1998 Jul 30;215(2):405-13.PMID: 9714839 [PubMed - indexed for MEDLINE]Related articles

    10.

    Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content.

    Singer GA, Hickey DA.

    Gene. 2003 Oct 23;317(1-2):39-47.PMID: 14604790 [PubMed - indexed for MEDLINE]Related articles

    11.

    Nature of selective constraints on synonymous codon usage of rice differs in GC-poor and GC-rich genes.

    Mukhopadhyay P, Basak S, Ghosh TC.

    Gene. 2007 Oct 1;400(1-2):71-81. Epub 2007 Jun 16.PMID: 17629420 [PubMed - indexed for MEDLINE]Related articles

    12.

    Evidence of selectively driven codon usage in rice: implications for GC content evolution of Gramineae genes.

    Guo X, Bao J, Fan L.

    FEBS Lett. 2007 Mar 6;581(5):1015-21. Epub 2007 Feb 8.PMID: 17306258 [PubMed - indexed for MEDLINE]Related articles

    13.

    Molecular evolution of synonymous codon usage in Populus.

    Ingvarsson PK.

    BMC Evol Biol. 2008 Nov 4;8:307.PMID: 18983655 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Gene expression level influences amino acid usage, but not codon usage, in the tsetse fly endosymbiont Wigglesworthia.

    Herbeck JT, Wall DP, Wernegreen JJ.

    Microbiology. 2003 Sep;149(Pt 9):2585-96.PMID: 12949182 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases.

    Stenico M, Lloyd AT, Sharp PM.

    Nucleic Acids Res. 1994 Jul 11;22(13):2437-46.PMID: 8041603 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Analysis of synonymous codon usage in H5N1 virus and other influenza A viruses.

    Zhou T, Gu W, Ma J, Sun X, Lu Z.

    Biosystems. 2005 Jul;81(1):77-86. Epub 2005 Apr 7.PMID: 15917130 [PubMed - indexed for MEDLINE]Related articles

    17.

    Analysis of synonymous codon usage bias in Chlamydia.

    Lü H, Zhao WM, Zheng Y, Wang H, Qi M, Yu XP.

    Acta Biochim Biophys Sin (Shanghai). 2005 Jan;37(1):1-10.PMID: 15645075 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    GC-compositional strand bias around transcription start sites in plants and fungi.

    Fujimori S, Washio T, Tomita M.

    BMC Genomics. 2005 Feb 28;6(1):26.PMID: 15733327 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes.

    Knight RD, Freeland SJ, Landweber LF.

    Genome Biol. 2001;2(4):RESEARCH0010. Epub 2001 Mar 22.PMID: 11305938 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Transcription-related mutations and GC content drive variation in nucleotide substitution rates across the genomes of Arabidopsis thaliana and Arabidopsis lyrata.

    DeRose-Wilson LJ, Gaut BS.

    BMC Evol Biol. 2007 Apr 23;7:66.PMID: 17451608 [PubMed - indexed for MEDLINE]Related articlesFree article

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