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    Results: 1 to 20 of 146

    1.

    GOAnnotator: linking protein GO annotations to evidence text.

    Couto FM, Silva MJ, Lee V, Dimmer E, Camon E, Apweiler R, Kirsch H, Rebholz-Schuhmann D.

    J Biomed Discov Collab. 2006 Dec 20;1:19.PMID: 17181854 [PubMed]Related articlesFree article

    2.

    An evaluation of GO annotation retrieval for BioCreAtIvE and GOA.

    Camon EB, Barrell DG, Dimmer EC, Lee V, Magrane M, Maslen J, Binns D, Apweiler R.

    BMC Bioinformatics. 2005;6 Suppl 1:S17. Epub 2005 May 24.PMID: 15960829 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    Evaluation of BioCreAtIvE assessment of task 2.

    Blaschke C, Leon EA, Krallinger M, Valencia A.

    BMC Bioinformatics. 2005;6 Suppl 1:S16. Epub 2005 May 24.PMID: 15960828 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology.

    Camon E, Magrane M, Barrell D, Lee V, Dimmer E, Maslen J, Binns D, Harte N, Lopez R, Apweiler R.

    Nucleic Acids Res. 2004 Jan 1;32(Database issue):D262-6.PMID: 14681408 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) Cellular Component curation.

    Van Auken K, Jaffery J, Chan J, Müller HM, Sternberg PW.

    BMC Bioinformatics. 2009 Jul 21;10:228.PMID: 19622167 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Integrating protein-protein interactions and text mining for protein function prediction.

    Jaeger S, Gaudan S, Leser U, Rebholz-Schuhmann D.

    BMC Bioinformatics. 2008 Jul 22;9 Suppl 8:S2.PMID: 18673526 [PubMed - in process]Related articlesFree article

    7.

    Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks.

    Daraselia N, Yuryev A, Egorov S, Mazo I, Ispolatov I.

    BMC Bioinformatics. 2007 Jul 10;8:243.PMID: 17620146 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    The GOA database in 2009--an integrated Gene Ontology Annotation resource.

    Barrell D, Dimmer E, Huntley RP, Binns D, O'Donovan C, Apweiler R.

    Nucleic Acids Res. 2009 Jan;37(Database issue):D396-403. Epub 2008 Oct 27.PMID: 18957448 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets.

    Aubry M, Monnier A, Chicault C, de Tayrac M, Galibert MD, Burgun A, Mosser J.

    BMC Bioinformatics. 2006 May 4;7:241.PMID: 16674810 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    Mining protein function from text using term-based support vector machines.

    Rice SB, Nenadic G, Stapley BJ.

    BMC Bioinformatics. 2005;6 Suppl 1:S22. Epub 2005 May 24.PMID: 15960835 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Discovering gene annotations in biomedical text databases.

    Cakmak A, Ozsoyoglu G.

    BMC Bioinformatics. 2008 Mar 6;9:143.PMID: 18325104 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Overview of the protein-protein interaction annotation extraction task of BioCreative II.

    Krallinger M, Leitner F, Rodriguez-Penagos C, Valencia A.

    Genome Biol. 2008;9 Suppl 2:S4. Epub 2008 Sep 1.PMID: 18834495 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Gene Ontology annotation of the rice blast fungus, Magnaporthe oryzae.

    Meng S, Brown DE, Ebbole DJ, Torto-Alalibo T, Oh YY, Deng J, Mitchell TK, Dean RA.

    BMC Microbiol. 2009 Feb 19;9 Suppl 1:S8. Review.PMID: 19278556 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Gene Ontology annotations at SGD: new data sources and annotation methods.

    Hong EL, Balakrishnan R, Dong Q, Christie KR, Park J, Binkley G, Costanzo MC, Dwight SS, Engel SR, Fisk DG, Hirschman JE, Hitz BC, Krieger CJ, Livstone MS, Miyasato SR, Nash RS, Oughtred R, Skrzypek MS, Weng S, Wong ED, Zhu KK, Dolinski K, Botstein D, Cherry JM.

    Nucleic Acids Res. 2008 Jan;36(Database issue):D577-81. Epub 2007 Nov 3.PMID: 17982175 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Information theory applied to the sparse gene ontology annotation network to predict novel gene function.

    Tao Y, Sam L, Li J, Friedman C, Lussier YA.

    Bioinformatics. 2007 Jul 1;23(13):i529-38.PMID: 17646340 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    PhenoGO: assigning phenotypic context to gene ontology annotations with natural language processing.

    Lussier Y, Borlawsky T, Rappaport D, Liu Y, Friedman C.

    Pac Symp Biocomput. 2006:64-75.PMID: 17094228 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Assessment of disease named entity recognition on a corpus of annotated sentences.

    Jimeno A, Jimenez-Ruiz E, Lee V, Gaudan S, Berlanga R, Rebholz-Schuhmann D.

    BMC Bioinformatics. 2008 Apr 11;9 Suppl 3:S3.PMID: 18426548 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Protein annotation as term categorization in the gene ontology using word proximity networks.

    Verspoor K, Cohn J, Joslyn C, Mniszewski S, Rechtsteiner A, Rocha LM, Simas T.

    BMC Bioinformatics. 2005;6 Suppl 1:S20. Epub 2005 May 24.PMID: 15960833 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach.

    Andorf C, Dobbs D, Honavar V.

    BMC Bioinformatics. 2007 Aug 3;8:284.PMID: 17683567 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Implications of compositionality in the gene ontology for its curation and usage.

    Ogren PV, Cohen KB, Hunter L.

    Pac Symp Biocomput. 2005:174-85.PMID: 15759624 [PubMed - indexed for MEDLINE]Related articlesFree article

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