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Bringing metabolic networks to life: integration of kinetic, metabolic, and proteomic data.

Liebermeister W, Klipp E.

Theor Biol Med Model. 2006 Dec 15;3:42.PMID: 17173670 [PubMed - indexed for MEDLINE]Related articlesFree article

Integration of enzyme kinetic data from various sources.

Borger S, Uhlendorf J, Helbig A, Liebermeister W.

In Silico Biol. 2007;7(2 Suppl):S73-9. Review.PMID: 17822393 [PubMed - indexed for MEDLINE]Related articlesFree article

Parametric and nonparametric population methods: their comparative performance in analysing a clinical dataset and two Monte Carlo simulation studies.

Bustad A, Terziivanov D, Leary R, Port R, Schumitzky A, Jelliffe R.

Clin Pharmacokinet. 2006;45(4):365-83.PMID: 16584284 [PubMed - indexed for MEDLINE]Related articles

Bringing metabolic networks to life: convenience rate law and thermodynamic constraints.

Liebermeister W, Klipp E.

Theor Biol Med Model. 2006 Dec 15;3:41.PMID: 17173669 [PubMed - indexed for MEDLINE]Related articlesFree article

Biochemical networks with uncertain parameters.

Liebermeister W, Klipp E.

Syst Biol (Stevenage). 2005 Sep;152(3):97-107.PMID: 16986274 [PubMed - indexed for MEDLINE]Related articles

A method for estimation of elasticities in metabolic networks using steady state and dynamic metabolomics data and linlog kinetics.

Nikerel IE, van Winden WA, van Gulik WM, Heijnen JJ.

BMC Bioinformatics. 2006 Dec 21;7:540.PMID: 17184531 [PubMed - indexed for MEDLINE]Related articlesFree article

Bayesian calibration of process-based forest models: bridging the gap between models and data.

Van Oijen M, Rougier J, Smith R.

Tree Physiol. 2005 Jul;25(7):915-27.PMID: 15870058 [PubMed - indexed for MEDLINE]Related articles

Inferring dynamic properties of biochemical reaction networks from structural knowledge.

Klipp E, Liebermeister W, Wierling C.

Genome Inform. 2004;15(1):125-37.PMID: 15712116 [PubMed - indexed for MEDLINE]Related articles

Diverse metabolic model parameters generate similar methionine cycle dynamics.

Piazza M, Feng XJ, Rabinowitz JD, Rabitz H.

J Theor Biol. 2008 Apr 21;251(4):628-39. Epub 2007 Dec 23.PMID: 18313076 [PubMed - indexed for MEDLINE]Related articlesFree article

Estimating parameters for generalized mass action models with connectivity information.

Ko CL, Voit EO, Wang FS.

BMC Bioinformatics. 2009 May 11;10:140.PMID: 19432964 [PubMed - indexed for MEDLINE]Related articlesFree article

Efficient context-dependent model building based on clustering posterior distributions for non-coding sequences.

Baele G, Peer YV, Vansteelandt S.

BMC Evol Biol. 2009 Apr 30;9:87.PMID: 19405957 [PubMed - indexed for MEDLINE]Related articlesFree article

Bayesian inference for stochastic kinetic models using a diffusion approximation.

Golightly A, Wilkinson DJ.

Biometrics. 2005 Sep;61(3):781-8.PMID: 16135029 [PubMed - indexed for MEDLINE]Related articles

Extraction of elementary rate constants from global network analysis of E. coli central metabolism.

Zhao J, Ridgway D, Broderick G, Kovalenko A, Ellison M.

BMC Syst Biol. 2008 May 7;2:41.PMID: 18462493 [PubMed - indexed for MEDLINE]Related articlesFree article

Dynamic Bayesian sensitivity analysis of a myocardial metabolic model.

Calvetti D, Hageman R, Occhipinti R, Somersalo E.

Math Biosci. 2008 Mar;212(1):1-21. Epub 2007 Nov 1.PMID: 18289611 [PubMed - indexed for MEDLINE]Related articlesFree article

Evidence synthesis, parameter correlation and probabilistic sensitivity analysis.

Ades AE, Claxton K, Sculpher M.

Health Econ. 2006 Apr;15(4):373-81.PMID: 16389628 [PubMed - indexed for MEDLINE]Related articles

A hybrid model of anaerobic E. coli GJT001: combination of elementary flux modes and cybernetic variables.

Kim JI, Varner JD, Ramkrishna D.

Biotechnol Prog. 2008 Sep-Oct;24(5):993-1006.PMID: 19194908 [PubMed - indexed for MEDLINE]Related articles

Composite likelihood estimation of demographic parameters.

Garrigan D.

BMC Genet. 2009 Nov 12;10:72.PMID: 19909534 [PubMed - indexed for MEDLINE]Related articlesFree article

Correlations between parameters in risk models: estimation and propagation of uncertainty by Markov Chain Monte Carlo.

Ades AE, Lu G.

Risk Anal. 2003 Dec;23(6):1165-72.PMID: 14641891 [PubMed]Related articles

A bayesian approach to parameter estimation for a crayfish (Procambarus spp.) bioaccumulation model.

Lin HI, Berzins DW, Myers L, George WJ, Abdelghani A, Watanabe KH.

Environ Toxicol Chem. 2004 Sep;23(9):2259-66.PMID: 15379005 [PubMed - indexed for MEDLINE]Related articles

Effects of branch length uncertainty on Bayesian posterior probabilities for phylogenetic hypotheses.

Kolaczkowski B, Thornton JW.

Mol Biol Evol. 2007 Sep;24(9):2108-18. Epub 2007 Jul 17.PMID: 17636043 [PubMed - indexed for MEDLINE]Related articlesFree article