PubMed

BISON: Bio-Interface for the Semi-global analysis Of Network patterns.

Besemann C, Denton A, Carr NJ, Prüss BM.

Source Code Biol Med. 2006 Nov 29;1:8.PMID: 17147788 [PubMed]Related articlesFree article

ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining.

Huan T, Sivachenko AY, Harrison SH, Chen JY.

BMC Bioinformatics. 2008 Aug 12;9 Suppl 9:S5.PMID: 18793469 [PubMed - indexed for MEDLINE]Related articlesFree article

BioCAD: an information fusion platform for bio-network inference and analysis.

Lee D, Kim S, Kim Y.

BMC Bioinformatics. 2007 Nov 27;8 Suppl 9:S2.PMID: 18047703 [PubMed - indexed for MEDLINE]Related articlesFree article

MetaMine--a tool to detect and analyse gene patterns in their environmental context.

Bohnebeck U, Lombardot T, Kottmann R, Glöckner FO.

BMC Bioinformatics. 2008 Oct 28;9:459.PMID: 18957118 [PubMed - indexed for MEDLINE]Related articlesFree article

Identifying promoter features of co-regulated genes with similar network motifs.

Harari O, del Val C, Romero-Zaliz R, Shin D, Huang H, Groisman EA, Zwir I.

BMC Bioinformatics. 2009 Apr 29;10 Suppl 4:S1.PMID: 19426448 [PubMed - indexed for MEDLINE]Related articlesFree article

GraphCrunch: a tool for large network analyses.

Milenković T, Lai J, Przulj N.

BMC Bioinformatics. 2008 Jan 30;9:70.PMID: 18230190 [PubMed - indexed for MEDLINE]Related articlesFree article

Children's questions: a mechanism for cognitive development.

Chouinard MM.

Monogr Soc Res Child Dev. 2007;72(1):vii-ix, 1-112; discussion 113-26.PMID: 17394580 [PubMed - indexed for MEDLINE]Related articles

POINeT: protein interactome with sub-network analysis and hub prioritization.

Lee SA, Chan CH, Chen TC, Yang CY, Huang KC, Tsai CH, Lai JM, Wang FS, Kao CY, Huang CY.

BMC Bioinformatics. 2009 Apr 21;10:114.PMID: 19379523 [PubMed - indexed for MEDLINE]Related articlesFree article

GEM-TREND: a web tool for gene expression data mining toward relevant network discovery.

Feng C, Araki M, Kunimoto R, Tamon A, Makiguchi H, Niijima S, Tsujimoto G, Okuno Y.

BMC Genomics. 2009 Sep 3;10:411.PMID: 19728865 [PubMed - indexed for MEDLINE]Related articlesFree article

Fast model-based protein homology detection without alignment.

Hochreiter S, Heusel M, Obermayer K.

Bioinformatics. 2007 Jul 15;23(14):1728-36. Epub 2007 May 8.PMID: 17488755 [PubMed - indexed for MEDLINE]Related articlesFree article

7TMRmine: a Web server for hierarchical mining of 7TMR proteins.

Lu G, Wang Z, Jones AM, Moriyama EN.

BMC Genomics. 2009 Jun 19;10:275.PMID: 19538753 [PubMed - indexed for MEDLINE]Related articlesFree article

CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks.

Baumbach J.

BMC Bioinformatics. 2007 Nov 6;8:429.PMID: 17986320 [PubMed - indexed for MEDLINE]Related articlesFree article

Arabidopsis Gene Family Profiler (aGFP)--user-oriented transcriptomic database with easy-to-use graphic interface.

Dupl'áková N, Renák D, Hovanec P, Honysová B, Twell D, Honys D.

BMC Plant Biol. 2007 Jul 23;7:39.PMID: 17645793 [PubMed - indexed for MEDLINE]Related articlesFree article

NERBio: using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition.

Tsai RT, Sung CL, Dai HJ, Hung HC, Sung TY, Hsu WL.

BMC Bioinformatics. 2006 Dec 18;7 Suppl 5:S11.PMID: 17254295 [PubMed - indexed for MEDLINE]Related articlesFree article

A predictive model of the oxygen and heme regulatory network in yeast.

Kundaje A, Xin X, Lan C, Lianoglou S, Zhou M, Zhang L, Leslie C.

PLoS Comput Biol. 2008 Nov;4(11):e1000224. Epub 2008 Nov 14.PMID: 19008939 [PubMed - indexed for MEDLINE]Related articlesFree article

[Development of antituberculous drugs: current status and future prospects]

Tomioka H, Namba K.

Kekkaku. 2006 Dec;81(12):753-74. Review. Japanese. PMID: 17240921 [PubMed - indexed for MEDLINE]Related articles

SciMiner: web-based literature mining tool for target identification and functional enrichment analysis.

Hur J, Schuyler AD, States DJ, Feldman EL.

Bioinformatics. 2009 Mar 15;25(6):838-40. Epub 2009 Feb 2.PMID: 19188191 [PubMed - indexed for MEDLINE]Related articlesFree article

Creating a text data-mining application for use in public health informatics.

Michel MC, Bero LA, Bright T.

Conf Proc IEEE Eng Med Biol Soc. 2004;5:3214-6.PMID: 17270964 [PubMed]Related articles

A data integration approach for cell cycle analysis oriented to model simulation in systems biology.

Alfieri R, Merelli I, Mosca E, Milanesi L.

BMC Syst Biol. 2007 Aug 1;1:35.PMID: 17678529 [PubMed - indexed for MEDLINE]Related articlesFree article

Mining co-regulated gene profiles for the detection of functional associations in gene expression data.

Gyenesei A, Wagner U, Barkow-Oesterreicher S, Stolte E, Schlapbach R.

Bioinformatics. 2007 Aug 1;23(15):1927-35. Epub 2007 May 30.PMID: 17537754 [PubMed - indexed for MEDLINE]Related articlesFree article