PubMed

Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology.

Cheung F, Haas BJ, Goldberg SM, May GD, Xiao Y, Town CD.

BMC Genomics. 2006 Oct 24;7:272.PMID: 17062153 [PubMed - indexed for MEDLINE]Related articlesFree article

Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches.

Cheung F, Win J, Lang JM, Hamilton J, Vuong H, Leach JE, Kamoun S, André Lévesque C, Tisserat N, Buell CR.

BMC Genomics. 2008 Nov 15;9:542.PMID: 19014603 [PubMed - indexed for MEDLINE]Related articlesFree article

Characterization of 954 bovine full-CDS cDNA sequences.

Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP.

BMC Genomics. 2005 Nov 23;6:166.PMID: 16305752 [PubMed - indexed for MEDLINE]Related articlesFree article

Generation, annotation, analysis and database integration of 16,500 white spruce EST clusters.

Pavy N, Paule C, Parsons L, Crow JA, Morency MJ, Cooke J, Johnson JE, Noumen E, Guillet-Claude C, Butterfield Y, Barber S, Yang G, Liu J, Stott J, Kirkpatrick R, Siddiqui A, Holt R, Marra M, Seguin A, Retzel E, Bousquet J, MacKay J.

BMC Genomics. 2005 Oct 19;6:144.PMID: 16236172 [PubMed - indexed for MEDLINE]Related articlesFree article

Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing.

Vega-Arreguín JC, Ibarra-Laclette E, Jiménez-Moraila B, Martínez O, Vielle-Calzada JP, Herrera-Estrella L, Herrera-Estrella A.

BMC Genomics. 2009 Jul 6;10:299.PMID: 19580677 [PubMed - indexed for MEDLINE]Related articlesFree article

Sequencing and analysis of the gene-rich space of cowpea.

Timko MP, Rushton PJ, Laudeman TW, Bokowiec MT, Chipumuro E, Cheung F, Town CD, Chen X.

BMC Genomics. 2008 Feb 27;9:103.PMID: 18304330 [PubMed - indexed for MEDLINE]Related articlesFree article

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome.

Novaes E, Drost DR, Farmerie WG, Pappas GJ Jr, Grattapaglia D, Sederoff RR, Kirst M.

BMC Genomics. 2008 Jun 30;9:312.PMID: 18590545 [PubMed - indexed for MEDLINE]Related articlesFree article

A BAC end view of the Musa acuminata genome.

Cheung F, Town CD.

BMC Plant Biol. 2007 Jun 11;7:29.PMID: 17562019 [PubMed - indexed for MEDLINE]Related articlesFree article

A new set of ESTs and cDNA clones from full-length and normalized libraries for gene discovery and functional characterization in citrus.

Marques MC, Alonso-Cantabrana H, Forment J, Arribas R, Alamar S, Conejero V, Perez-Amador MA.

BMC Genomics. 2009 Sep 11;10:428.PMID: 19747386 [PubMed - indexed for MEDLINE]Related articlesFree article

A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis).

Ralph SG, Chun HJ, Kolosova N, Cooper D, Oddy C, Ritland CE, Kirkpatrick R, Moore R, Barber S, Holt RA, Jones SJ, Marra MA, Douglas CJ, Ritland K, Bohlmann J.

BMC Genomics. 2008 Oct 14;9:484.PMID: 18854048 [PubMed - indexed for MEDLINE]Related articlesFree article

High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families.

Szittya G, Moxon S, Santos DM, Jing R, Fevereiro MP, Moulton V, Dalmay T.

BMC Genomics. 2008 Dec 9;9:593.PMID: 19068109 [PubMed - indexed for MEDLINE]Related articlesFree article

Generation and analysis of large-scale expressed sequence tags (ESTs) from a full-length enriched cDNA library of porcine backfat tissue.

Kim TH, Kim NS, Lim D, Lee KT, Oh JH, Park HS, Jang GW, Kim HY, Jeon M, Choi BH, Lee HY, Chung HY, Kim H.

BMC Genomics. 2006 Feb 27;7:36.PMID: 16504160 [PubMed - indexed for MEDLINE]Related articlesFree article

Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains.

Nelson W, Luo M, Ma J, Estep M, Estill J, He R, Talag J, Sisneros N, Kudrna D, Kim H, Ammiraju JS, Collura K, Bharti AK, Messing J, Wing RA, SanMiguel P, Bennetzen JL, Soderlund C.

BMC Genomics. 2008 Dec 19;9:621.PMID: 19099592 [PubMed - indexed for MEDLINE]Related articlesFree article

Peanut gene expression profiling in developing seeds at different reproduction stages during Aspergillus parasiticus infection.

Guo B, Chen X, Dang P, Scully BT, Liang X, Holbrook CC, Yu J, Culbreath AK.

BMC Dev Biol. 2008 Feb 4;8:12.PMID: 18248674 [PubMed - indexed for MEDLINE]Related articlesFree article

Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding.

Ralph SG, Chun HJ, Cooper D, Kirkpatrick R, Kolosova N, Gunter L, Tuskan GA, Douglas CJ, Holt RA, Jones SJ, Marra MA, Bohlmann J.

BMC Genomics. 2008 Jan 29;9:57.PMID: 18230180 [PubMed - indexed for MEDLINE]Related articlesFree article

Expressed sequence tag analysis of adult human lens for the NEIBank Project: over 2000 non-redundant transcripts, novel genes and splice variants.

Wistow G, Bernstein SL, Wyatt MK, Behal A, Touchman JW, Bouffard G, Smith D, Peterson K.

Mol Vis. 2002 Jun 15;8:171-84.PMID: 12107413 [PubMed - indexed for MEDLINE]Related articlesFree article

Tracembler--software for in-silico chromosome walking in unassembled genomes.

Dong Q, Wilkerson MD, Brendel V.

BMC Bioinformatics. 2007 May 9;8:151.PMID: 17490482 [PubMed - indexed for MEDLINE]Related articlesFree article

Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase.

Fleury E, Huvet A, Lelong C, de Lorgeril J, Boulo V, Gueguen Y, Bachère E, Tanguy A, Moraga D, Fabioux C, Lindeque P, Shaw J, Reinhardt R, Prunet P, Davey G, Lapègue S, Sauvage C, Corporeau C, Moal J, Gavory F, Wincker P, Moreews F, Klopp C, Mathieu M, Boudry P, Favrel P.

BMC Genomics. 2009 Jul 29;10:341.PMID: 19640306 [PubMed - indexed for MEDLINE]Related articlesFree article

Comparison of next generation sequencing technologies for transcriptome characterization.

Wall PK, Leebens-Mack J, Chanderbali AS, Barakat A, Wolcott E, Liang H, Landherr L, Tomsho LP, Hu Y, Carlson JE, Ma H, Schuster SC, Soltis DE, Soltis PS, Altman N, dePamphilis CW.

BMC Genomics. 2009 Aug 1;10:347.PMID: 19646272 [PubMed - indexed for MEDLINE]Related articlesFree article

Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing.

Weber AP, Weber KL, Carr K, Wilkerson C, Ohlrogge JB.

Plant Physiol. 2007 May;144(1):32-42. Epub 2007 Mar 9.PMID: 17351049 [PubMed - indexed for MEDLINE]Related articlesFree article