Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

    Results: 1 to 20 of 356

    1.

    Pairagon+N-SCAN_EST: a model-based gene annotation pipeline.

    Arumugam M, Wei C, Brown RH, Brent MR.

    Genome Biol. 2006;7 Suppl 1:S5.1-10. Epub 2006 Aug 7.

    PMID:
    16925839
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Using ESTs to improve the accuracy of de novo gene prediction.

    Wei C, Brent MR.

    BMC Bioinformatics. 2006 Jul 3;7:327.

    PMID:
    16817966
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome.

    Stanke M, Tzvetkova A, Morgenstern B.

    Genome Biol. 2006;7 Suppl 1:S11.1-8. Epub 2006 Aug 7.

    PMID:
    16925833
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    OrthoSelect: a protocol for selecting orthologous groups in phylogenomics.

    Schreiber F, Pick K, Erpenbeck D, Wörheide G, Morgenstern B.

    BMC Bioinformatics. 2009 Jul 16;10:219.

    PMID:
    19607672
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Pairagon: a highly accurate, HMM-based cDNA-to-genome aligner.

    Lu DV, Brown RH, Arumugam M, Brent MR.

    Bioinformatics. 2009 Jul 1;25(13):1587-93. Epub 2009 May 4.

    PMID:
    19414532
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Characterization of 954 bovine full-CDS cDNA sequences.

    Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP.

    BMC Genomics. 2005 Nov 23;6:166.

    PMID:
    16305752
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Exogean: a framework for annotating protein-coding genes in eukaryotic genomic DNA.

    Djebali S, Delaplace F, Roest Crollius H.

    Genome Biol. 2006;7 Suppl 1:S7.1-10. Epub 2006 Aug 7.

    PMID:
    16925841
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    AceView: a comprehensive cDNA-supported gene and transcripts annotation.

    Thierry-Mieg D, Thierry-Mieg J.

    Genome Biol. 2006;7 Suppl 1:S12.1-14. Epub 2006 Aug 7.

    PMID:
    16925834
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    GENCODE: producing a reference annotation for ENCODE.

    Harrow J, Denoeud F, Frankish A, Reymond A, Chen CK, Chrast J, Lagarde J, Gilbert JG, Storey R, Swarbreck D, Rossier C, Ucla C, Hubbard T, Antonarakis SE, Guigo R.

    Genome Biol. 2006;7 Suppl 1:S4.1-9. Epub 2006 Aug 7.

    PMID:
    16925838
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    Gene structure prediction and alternative splicing analysis using genomically aligned ESTs.

    Kan Z, Rouchka EC, Gish WR, States DJ.

    Genome Res. 2001 May;11(5):889-900.

    PMID:
    11337482
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    cDNA sequences reveal considerable gene prediction inaccuracy in the Plasmodium falciparum genome.

    Lu F, Jiang H, Ding J, Mu J, Valenzuela JG, Ribeiro JM, Su XZ.

    BMC Genomics. 2007 Jul 27;8:255.

    PMID:
    17662120
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    Vertebrate gene finding from multiple-species alignments using a two-level strategy.

    Carter D, Durbin R.

    Genome Biol. 2006;7 Suppl 1:S6.1-12. Epub 2006 Aug 7.

    PMID:
    16925840
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    [Correction of five different types of errors of model REFSEQs appeared in NCBI human gene database only by using two novel human genes C17orf32 and ZNF362].

    Zhang DL, Li YD, Ji L.

    Yi Chuan Xue Bao. 2004 Apr;31(4):325-34. Chinese.

    PMID:
    15487498
    [PubMed - indexed for MEDLINE]
    15.

    The Ensembl automatic gene annotation system.

    Curwen V, Eyras E, Andrews TD, Clarke L, Mongin E, Searle SM, Clamp M.

    Genome Res. 2004 May;14(5):942-50.

    PMID:
    15123590
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Analysis of EST-driven gene annotation in human genomic sequence.

    Bailey LC Jr, Searls DB, Overton GC.

    Genome Res. 1998 Apr;8(4):362-76.

    PMID:
    9548972
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    Bridging expressed sequence alignments through targeted cDNA sequencing.

    Xie H, Diber A, Pollock S, Nemzer S, Safer H, Meloon B, Olson A, Hwang JJ, Endress GA, Savitsky K, Gill-More R.

    Genomics. 2004 Apr;83(4):572-6.

    PMID:
    15028280
    [PubMed - indexed for MEDLINE]
    18.

    Genie--gene finding in Drosophila melanogaster.

    Reese MG, Kulp D, Tammana H, Haussler D.

    Genome Res. 2000 Apr;10(4):529-38.

    PMID:
    10779493
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    EGASP: the human ENCODE Genome Annotation Assessment Project.

    Guigó R, Flicek P, Abril JF, Reymond A, Lagarde J, Denoeud F, Antonarakis S, Ashburner M, Bajic VB, Birney E, Castelo R, Eyras E, Ucla C, Gingeras TR, Harrow J, Hubbard T, Lewis SE, Reese MG.

    Genome Biol. 2006;7 Suppl 1:S2.1-31. Epub 2006 Aug 7. Review.

    PMID:
    16925836
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

    EAnnot: a genome annotation tool using experimental evidence.

    Ding L, Sabo A, Berkowicz N, Meyer RR, Shotland Y, Johnson MR, Pepin KH, Wilson RK, Spieth J.

    Genome Res. 2004 Dec;14(12):2503-9.

    PMID:
    15574829
    [PubMed - indexed for MEDLINE]
    Free PMC Article

      Display Settings:

      Format
      Items per page
      Sort by

      Send to:

      Choose Destination

      Supplemental Content

      Find related data

      Write to the Help Desk