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    Results: 1 to 20 of 131

    1.

    Functional clustering of yeast proteins from the protein-protein interaction network.

    Sen TZ, Kloczkowski A, Jernigan RL.

    BMC Bioinformatics. 2006 Jul 24;7:355.PMID: 16863590 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Development and implementation of an algorithm for detection of protein complexes in large interaction networks.

    Altaf-Ul-Amin M, Shinbo Y, Mihara K, Kurokawa K, Kanaya S.

    BMC Bioinformatics. 2006 Apr 14;7:207.PMID: 16613608 [PubMed - indexed for MEDLINE]Related articlesFree article

    3.

    Unraveling condition specific gene transcriptional regulatory networks in Saccharomyces cerevisiae.

    Kim H, Hu W, Kluger Y.

    BMC Bioinformatics. 2006 Mar 21;7:165.PMID: 16551355 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Protein complex prediction via cost-based clustering.

    King AD, Przulj N, Jurisica I.

    Bioinformatics. 2004 Nov 22;20(17):3013-20. Epub 2004 Jun 4.PMID: 15180928 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Growing functional modules from a seed protein via integration of protein interaction and gene expression data.

    Maraziotis IA, Dimitrakopoulou K, Bezerianos A.

    BMC Bioinformatics. 2007 Oct 23;8:408.PMID: 17956603 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Integrated analysis of multiple data sources reveals modular structure of biological networks.

    Lu H, Shi B, Wu G, Zhang Y, Zhu X, Zhang Z, Liu C, Zhao Y, Wu T, Wang J, Chen R.

    Biochem Biophys Res Commun. 2006 Jun 23;345(1):302-9. Epub 2006 Apr 27.PMID: 16690033 [PubMed - indexed for MEDLINE]Related articles

    7.

    PathFinder: mining signal transduction pathway segments from protein-protein interaction networks.

    Bebek G, Yang J.

    BMC Bioinformatics. 2007 Sep 13;8:335.PMID: 17854489 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    Detecting functional modules in the yeast protein-protein interaction network.

    Chen J, Yuan B.

    Bioinformatics. 2006 Sep 15;22(18):2283-90. Epub 2006 Jul 12.PMID: 16837529 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Inferring network interactions within a cell.

    Carter GW.

    Brief Bioinform. 2005 Dec;6(4):380-9. Review.PMID: 16420736 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    Functional topology in a network of protein interactions.

    Przulj N, Wigle DA, Jurisica I.

    Bioinformatics. 2004 Feb 12;20(3):340-8.PMID: 14960460 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Systematic interpretation of genetic interactions using protein networks.

    Kelley R, Ideker T.

    Nat Biotechnol. 2005 May;23(5):561-6.PMID: 15877074 [PubMed - indexed for MEDLINE]Related articles

    12.

    A structural approach for finding functional modules from large biological networks.

    Mete M, Tang F, Xu X, Yuruk N.

    BMC Bioinformatics. 2008 Aug 12;9 Suppl 9:S19.PMID: 18793464 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Modular organization of protein interaction networks.

    Luo F, Yang Y, Chen CF, Chang R, Zhou J, Scheuermann RH.

    Bioinformatics. 2007 Jan 15;23(2):207-14. Epub 2006 Nov 8. Erratum in: Bioinformatics. 2007 Apr 1;23(7):916. PMID: 17092991 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Connectivity and expression in protein networks: proteins in a complex are uniformly expressed.

    Carmi S, Levanon EY, Havlin S, Eisenberg E.

    Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Mar;73(3 Pt 1):031909. Epub 2006 Mar 14.PMID: 16605560 [PubMed - indexed for MEDLINE]Related articles

    15.

    In search of the biological significance of modular structures in protein networks.

    Wang Z, Zhang J.

    PLoS Comput Biol. 2007 Jun;3(6):e107. Epub 2007 Apr 30. Erratum in: PLoS Comput Biol. 2007 Jul;3(7):e146. PMID: 17542644 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    Gene function prediction by a combined analysis of gene expression data and protein-protein interaction data.

    Xiao G, Pan W.

    J Bioinform Comput Biol. 2005 Dec;3(6):1371-89.PMID: 16374912 [PubMed - indexed for MEDLINE]Related articles

    17.

    Modeling interactome: scale-free or geometric?

    Przulj N, Corneil DG, Jurisica I.

    Bioinformatics. 2004 Dec 12;20(18):3508-15. Epub 2004 Jul 29.PMID: 15284103 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Gene duplication and hierarchical modularity in intracellular interaction networks.

    Hallinan J.

    Biosystems. 2004 Apr-Jun;74(1-3):51-62.PMID: 15125992 [PubMed - indexed for MEDLINE]Related articles

    19.

    A Gibbs sampler for the identification of gene expression and network connectivity consistency.

    Brynildsen MP, Tran LM, Liao JC.

    Bioinformatics. 2006 Dec 15;22(24):3040-6. Epub 2006 Oct 23.PMID: 17060361 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Influence of degree correlations on network structure and stability in protein-protein interaction networks.

    Friedel CC, Zimmer R.

    BMC Bioinformatics. 2007 Aug 9;8:297.PMID: 17688687 [PubMed - indexed for MEDLINE]Related articlesFree article

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