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Rooting the tree of life by transition analyses.

Cavalier-Smith T.

Biol Direct. 2006 Jul 11;1:19.PMID: 16834776 [PubMed]Related articlesFree article

The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification.

Cavalier-Smith T.

Int J Syst Evol Microbiol. 2002 Jan;52(Pt 1):7-76. Review.PMID: 11837318 [PubMed - indexed for MEDLINE]Related articlesFree article

The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa.

Cavalier-Smith T.

Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):297-354. Review.PMID: 11931142 [PubMed - indexed for MEDLINE]Related articlesFree article

Deep phylogeny, ancestral groups and the four ages of life.

Cavalier-Smith T.

Philos Trans R Soc Lond B Biol Sci. 2010 Jan 12;365(1537):111-32.PMID: 20008390 [PubMed - in process]Related articlesFree article

Evolution of glutamate dehydrogenase genes: evidence for two paralogous protein families and unusual branching patterns of the archaebacteria in the universal tree of life.

Benachenhou-Lahfa N, Forterre P, Labedan B.

J Mol Evol. 1993 Apr;36(4):335-46.PMID: 8315654 [PubMed - indexed for MEDLINE]Related articles

Genome beginnings: rooting the tree of life.

Lake JA, Skophammer RG, Herbold CW, Servin JA.

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Evidence for a gram-positive, eubacterial root of the tree of life.

Skophammer RG, Servin JA, Herbold CW, Lake JA.

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On the origins of cells: a hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells.

Martin W, Russell MJ.

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Phylogeny of choanozoa, apusozoa, and other protozoa and early eukaryote megaevolution.

Cavalier-Smith T, Chao EE.

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Predation and eukaryote cell origins: a coevolutionary perspective.

Cavalier-Smith T.

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The rooting of the universal tree of life is not reliable.

Philippe H, Forterre P.

J Mol Evol. 1999 Oct;49(4):509-23.PMID: 10486008 [PubMed - indexed for MEDLINE]Related articles

Cell evolution and Earth history: stasis and revolution.

Cavalier-Smith T.

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The natural evolutionary relationships among prokaryotes.

Gupta RS.

Crit Rev Microbiol. 2000;26(2):111-31. Review.PMID: 10890353 [PubMed - indexed for MEDLINE]Related articles

Archaea and the prokaryote-to-eukaryote transition.

Brown JR, Doolittle WF.

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Origins of the machinery of recombination and sex.

Cavalier-Smith T.

Heredity. 2002 Feb;88(2):125-41. Review.PMID: 11932771 [PubMed - indexed for MEDLINE]Related articlesFree article

Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes.

Iwabe N, Kuma K, Hasegawa M, Osawa S, Miyata T.

Proc Natl Acad Sci U S A. 1989 Dec;86(23):9355-9.PMID: 2531898 [PubMed - indexed for MEDLINE]Related articlesFree article

Evidence for a new root of the tree of life.

Lake JA, Servin JA, Herbold CW, Skophammer RG.

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A revised six-kingdom system of life.

Cavalier-Smith T.

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Eubacteria, halobacteria, and the origin of photosynthesis: the photocytes.

Lake JA, Clark MW, Henderson E, Fay SP, Oakes M, Scheinman A, Thornber JP, Mah RA.

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Kingdoms Protozoa and Chromista and the eozoan root of the eukaryotic tree.

Cavalier-Smith T.

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