PubMed

Collaborative development of the Arrowsmith two node search interface designed for laboratory investigators.

Smalheiser NR, Torvik VI, Bischoff-Grethe A, Burhans LB, Gabriel M, Homayouni R, Kashef A, Martone ME, Perkins GA, Price DL, Talk AC, West R.

J Biomed Discov Collab. 2006 Jul 3;1:8.PMID: 16817965 [PubMed]Related articlesFree article

Arrowsmith two-node search interface: a tutorial on finding meaningful links between two disparate sets of articles in MEDLINE.

Smalheiser NR, Torvik VI, Zhou W.

Comput Methods Programs Biomed. 2009 May;94(2):190-7. Epub 2009 Jan 30.PMID: 19185946 [PubMed - indexed for MEDLINE]Related articles

A quantitative model for linking two disparate sets of articles in MEDLINE.

Torvik VI, Smalheiser NR.

Bioinformatics. 2007 Jul 1;23(13):1658-65. Epub 2007 Apr 26.PMID: 17463015 [PubMed - indexed for MEDLINE]Related articlesFree article

Using ARROWSMITH: a computer-assisted approach to formulating and assessing scientific hypotheses.

Smalheiser NR, Swanson DR.

Comput Methods Programs Biomed. 1998 Nov;57(3):149-53.PMID: 9822851 [PubMed - indexed for MEDLINE]Related articles

An active visual search interface for Medline.

Xuan W, Dai M, Mirel B, Wilson J, Athey B, Watson SJ, Meng F.

Comput Syst Bioinformatics Conf. 2007;6:359-69.PMID: 17951838 [PubMed - indexed for MEDLINE]Related articlesFree article

ADAM: another database of abbreviations in MEDLINE.

Zhou W, Torvik VI, Smalheiser NR.

Bioinformatics. 2006 Nov 15;22(22):2813-8. Epub 2006 Sep 18.PMID: 16982707 [PubMed - indexed for MEDLINE]Related articlesFree article

New bioinformatics resources for metabolomics.

Markley JL, Anderson ME, Cui Q, Eghbalnia HR, Lewis IA, Hegeman AD, Li J, Schulte CF, Sussman MR, Westler WM, Ulrich EL, Zolnai Z.

Pac Symp Biocomput. 2007:157-68.PMID: 17990489 [PubMed - indexed for MEDLINE]Related articlesFree article

Text similarity: an alternative way to search MEDLINE.

Lewis J, Ossowski S, Hicks J, Errami M, Garner HR.

Bioinformatics. 2006 Sep 15;22(18):2298-304. Epub 2006 Aug 22.PMID: 16926219 [PubMed - indexed for MEDLINE]Related articlesFree article

BioPP: a tool for web-publication of biological networks.

Viswanathan GA, Nudelman G, Patil S, Sealfon SC.

BMC Bioinformatics. 2007 May 22;8:168.PMID: 17519033 [PubMed - indexed for MEDLINE]Related articlesFree article

MScanner: a classifier for retrieving Medline citations.

Poulter GL, Rubin DL, Altman RB, Seoighe C.

BMC Bioinformatics. 2008 Feb 19;9:108.PMID: 18284683 [PubMed - indexed for MEDLINE]Related articlesFree article

Development of a bibliographical search matrix exemplified by a computer-assisted literature search on the evidence of condyle position analysis.

Rybczynski A, Vahle-Hinz K, Jakstat H, Ahlers MO.

Int J Comput Dent. 2009;12(3):207-21. English, German. PMID: 19715146 [PubMed - indexed for MEDLINE]Related articles

A comparison study on algorithms of detecting long forms for short forms in biomedical text.

Torii M, Hu ZZ, Song M, Wu CH, Liu H.

BMC Bioinformatics. 2007 Nov 27;8 Suppl 9:S5.PMID: 18047706 [PubMed - indexed for MEDLINE]Related articlesFree article

A Novel Cross-Disciplinary Multi-Institute Approach to Translational Cancer Research: Lessons Learned from Pennsylvania Cancer Alliance Bioinformatics Consortium (PCABC).

Patel AA, Gilbertson JR, Showe LC, London JW, Ross E, Ochs MF, Carver J, Lazarus A, Parwani AV, Dhir R, Beck JR, Liebman M, Garcia FU, Prichard J, Wilkerson M, Herberman RB, Becich MJ; the PCABC.

Cancer Inform. 2007 Jun 8;3:255-274.PMID: 19455246 [PubMed - as supplied by publisher]Related articlesFree article

SerbGO: searching for the best GO tool.

Mosquera JL, Sánchez-Pla A.

Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W368-71. Epub 2008 May 14.PMID: 18480123 [PubMed - indexed for MEDLINE]Related articlesFree article

Open tools for storage and management of quantitative image data.

Moore J, Allan C, Burel JM, Loranger B, MacDonald D, Monk J, Swedlow JR.

Methods Cell Biol. 2008;85:555-70.PMID: 18155479 [PubMed - indexed for MEDLINE]Related articles

Medline search engine for finding genetic markers with biological significance.

Xuan W, Wang P, Watson SJ, Meng F.

Bioinformatics. 2007 Sep 15;23(18):2477-84. Epub 2007 Sep 6.PMID: 17823133 [PubMed - indexed for MEDLINE]Related articlesFree article

Developing a sensitive search strategy in MEDLINE to retrieve studies on assessment of the diagnostic performance of imaging techniques.

Astin MP, Brazzelli MG, Fraser CM, Counsell CE, Needham G, Grimshaw JM.

Radiology. 2008 May;247(2):365-73. Epub 2008 Mar 27.PMID: 18372447 [PubMed - indexed for MEDLINE]Related articlesFree article

Technical development of PubMed interact: an improved interface for MEDLINE/PubMed searches.

Muin M, Fontelo P.

BMC Med Inform Decis Mak. 2006 Nov 3;6:36.PMID: 17083729 [PubMed - indexed for MEDLINE]Related articlesFree article

Tools for integrated sequence-structure analysis with UCSF Chimera.

Meng EC, Pettersen EF, Couch GS, Huang CC, Ferrin TE.

BMC Bioinformatics. 2006 Jul 12;7:339.PMID: 16836757 [PubMed - indexed for MEDLINE]Related articlesFree article

WASP: a Web-based Allele-Specific PCR assay designing tool for detecting SNPs and mutations.

Wangkumhang P, Chaichoompu K, Ngamphiw C, Ruangrit U, Chanprasert J, Assawamakin A, Tongsima S.

BMC Genomics. 2007 Aug 14;8:275.PMID: 17697334 [PubMed - indexed for MEDLINE]Related articlesFree article