PubMed

What properties characterize the hub proteins of the protein-protein interaction network of Saccharomyces cerevisiae?

Ekman D, Light S, Björklund AK, Elofsson A.

Genome Biol. 2006;7(6):R45.PMID: 16780599 [PubMed - indexed for MEDLINE]Related articlesFree article

Stratus not altocumulus: a new view of the yeast protein interaction network.

Batada NN, Reguly T, Breitkreutz A, Boucher L, Breitkreutz BJ, Hurst LD, Tyers M.

PLoS Biol. 2006 Oct;4(10):e317.PMID: 16984220 [PubMed - indexed for MEDLINE]Related articlesFree article

Hubs with network motifs organize modularity dynamically in the protein-protein interaction network of yeast.

Jin G, Zhang S, Zhang XS, Chen L.

PLoS One. 2007 Nov 21;2(11):e1207.PMID: 18030341 [PubMed - indexed for MEDLINE]Related articlesFree article

The role of disorder in interaction networks: a structural analysis.

Kim PM, Sboner A, Xia Y, Gerstein M.

Mol Syst Biol. 2008;4:179. Epub 2008 Mar 25.PMID: 18364713 [PubMed - indexed for MEDLINE]Related articlesFree article

Exploring the evolutionary rate differences of party hub and date hub proteins in Saccharomyces cerevisiae protein-protein interaction network.

Kahali B, Ahmad S, Ghosh TC.

Gene. 2009 Jan 15;429(1-2):18-22. Epub 2008 Oct 10.PMID: 18973798 [PubMed - indexed for MEDLINE]Related articles

Evidence for dynamically organized modularity in the yeast protein-protein interaction network.

Han JD, Bertin N, Hao T, Goldberg DS, Berriz GF, Zhang LV, Dupuy D, Walhout AJ, Cusick ME, Roth FP, Vidal M.

Nature. 2004 Jul 1;430(6995):88-93. Epub 2004 Jun 9. Erratum in: Nature. 2004 Jul 15;430(6997):380. PMID: 15190252 [PubMed - indexed for MEDLINE]Related articles

Role of intrinsic disorder in transient interactions of hub proteins.

Singh GP, Ganapathi M, Dash D.

Proteins. 2007 Mar 1;66(4):761-5.PMID: 17154416 [PubMed - indexed for MEDLINE]Related articles

Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes.

Haynes C, Oldfield CJ, Ji F, Klitgord N, Cusick ME, Radivojac P, Uversky VN, Vidal M, Iakoucheva LM.

PLoS Comput Biol. 2006 Aug 4;2(8):e100. Epub 2006 Jun 23.PMID: 16884331 [PubMed - indexed for MEDLINE]Related articlesFree article

Why do hubs tend to be essential in protein networks?

He X, Zhang J.

PLoS Genet. 2006 Jun 2;2(6):e88. Epub 2006 Apr 26.PMID: 16751849 [PubMed - indexed for MEDLINE]Related articlesFree article

Comparative analysis of Saccharomyces cerevisiae WW domains and their interacting proteins.

Hesselberth JR, Miller JP, Golob A, Stajich JE, Michaud GA, Fields S.

Genome Biol. 2006;7(4):R30. Epub 2006 Apr 10.PMID: 16606443 [PubMed - indexed for MEDLINE]Related articlesFree article

The properties of hub proteins in a yeast-aggregated cell cycle network and its phase sub-networks.

Wu X, Guo J, Zhang DY, Lin K.

Proteomics. 2009 Oct;9(20):4812-24.PMID: 19743420 [PubMed - indexed for MEDLINE]Related articles

Human cancer protein-protein interaction network: a structural perspective.

Kar G, Gursoy A, Keskin O.

PLoS Comput Biol. 2009 Dec;5(12):e1000601. Epub .PMID: 20011507 [PubMed - indexed for MEDLINE]Related articlesFree article

Quantitative assessment of the structural bias in protein-protein interaction assays.

Björklund AK, Light S, Hedin L, Elofsson A.

Proteomics. 2008 Nov;8(22):4657-67.PMID: 18924110 [PubMed - indexed for MEDLINE]Related articles

Modularity and evolutionary constraint on proteins.

Fraser HB.

Nat Genet. 2005 Apr;37(4):351-2. Epub 2005 Mar 6.PMID: 15750592 [PubMed - indexed for MEDLINE]Related articles

Co-expression among constituents of a motif in the protein-protein interaction network.

Bhardwaj N, Lu H.

J Bioinform Comput Biol. 2009 Feb;7(1):1-17.PMID: 19226657 [PubMed - indexed for MEDLINE]Related articlesFree article

Peeling the yeast protein network.

Wuchty S, Almaas E.

Proteomics. 2005 Feb;5(2):444-9.PMID: 15627958 [PubMed - indexed for MEDLINE]Related articles

Influence of degree correlations on network structure and stability in protein-protein interaction networks.

Friedel CC, Zimmer R.

BMC Bioinformatics. 2007 Aug 9;8:297.PMID: 17688687 [PubMed - indexed for MEDLINE]Related articlesFree article

Evolutionary and physiological importance of hub proteins.

Batada NN, Hurst LD, Tyers M.

PLoS Comput Biol. 2006 Jul 14;2(7):e88. Epub 2006 Jun 5.PMID: 16839197 [PubMed - indexed for MEDLINE]Related articlesFree article

Genome-wide system analysis reveals stable yet flexible network dynamics in yeast.

Gustafsson M, Hörnquist M, Björkegren J, Tegnér J.

IET Syst Biol. 2009 Jul;3(4):219-28.PMID: 19640161 [PubMed - indexed for MEDLINE]Related articles

Flexible nets. The roles of intrinsic disorder in protein interaction networks.

Dunker AK, Cortese MS, Romero P, Iakoucheva LM, Uversky VN.

FEBS J. 2005 Oct;272(20):5129-48. Review.PMID: 16218947 [PubMed - indexed for MEDLINE]Related articlesFree article