PubMed

Enhancing access to the Bibliome: the TREC 2004 Genomics Track.

Hersh WR, Bhupatiraju RT, Ross L, Roberts P, Cohen AM, Kraemer DF.

J Biomed Discov Collab. 2006 Mar 13;1:3.PMID: 16722581 [PubMed]Related articlesFree article

Enhancing access to the Bibliome: the TREC Genomics Track.

Hersh W, Bhupatiraju RT, Corley S.

Stud Health Technol Inform. 2004;107(Pt 2):773-7.PMID: 15360917 [PubMed - indexed for MEDLINE]Related articles

The TREC 2004 genomics track categorization task: classifying full text biomedical documents.

Cohen AM, Hersh WR.

J Biomed Discov Collab. 2006 Mar 14;1:4.PMID: 16722582 [PubMed]Related articlesFree article

Objective and automated protocols for the evaluation of biomedical search engines using No Title Evaluation protocols.

Campagne F.

BMC Bioinformatics. 2008 Feb 29;9:132.PMID: 18312673 [PubMed - indexed for MEDLINE]Related articlesFree article

Essie: a concept-based search engine for structured biomedical text.

Ide NC, Loane RF, Demner-Fushman D.

J Am Med Inform Assoc. 2007 May-Jun;14(3):253-63. Epub 2007 Feb 28.PMID: 17329729 [PubMed - indexed for MEDLINE]Related articlesFree article

A comparative analysis of retrieval features used in the TREC 2006 Genomics Track passage retrieval task.

Rekapalli HK, Cohen AM, Hersh WR.

AMIA Annu Symp Proc. 2007 Oct 11:620-4.PMID: 18693910 [PubMed - indexed for MEDLINE]Related articlesFree article

Advancing biomedical image retrieval: development and analysis of a test collection.

Hersh WR, Müller H, Jensen JR, Yang J, Gorman PN, Ruch P.

J Am Med Inform Assoc. 2006 Sep-Oct;13(5):488-96. Epub 2006 Jun 23.PMID: 16799124 [PubMed - indexed for MEDLINE]Related articlesFree article

Integrating image data into biomedical text categorization.

Shatkay H, Chen N, Blostein D.

Bioinformatics. 2006 Jul 15;22(14):e446-53.PMID: 16873506 [PubMed - indexed for MEDLINE]Related articlesFree article

General-purpose search techniques for genomic text.

Chattaraj A, Williams HE, Cannane A.

Genome Inform. 2004;15(2):42-51.PMID: 15706490 [PubMed - indexed for MEDLINE]Related articles

Effective access to distributed heterogeneous medical text databases.

Croft WB, Callan JP, Aronow DB.

Medinfo. 1995;8 Pt 2:1719.PMID: 8591570 [PubMed - indexed for MEDLINE]Related articles

PageRank without hyperlinks: reranking with PubMed related article networks for biomedical text retrieval.

Lin J.

BMC Bioinformatics. 2008 Jun 6;9:270.PMID: 18538027 [PubMed - indexed for MEDLINE]Related articlesFree article

Using medline queries to generate image retrieval tasks for benchmarking.

Müller H, Kalpathy-Cramer J, Hersh W, Geissbuhler A.

Stud Health Technol Inform. 2008;136:523-8.PMID: 18487784 [PubMed - indexed for MEDLINE]Related articles

Is searching full text more effective than searching abstracts?

Lin J.

BMC Bioinformatics. 2009 Feb 3;10:46.PMID: 19192280 [PubMed - indexed for MEDLINE]Related articlesFree article

Evaluating relevance ranking strategies for MEDLINE retrieval.

Lu Z, Kim W, Wilbur WJ.

J Am Med Inform Assoc. 2009 Jan-Feb;16(1):32-6. Epub 2008 Oct 24.PMID: 18952932 [PubMed - indexed for MEDLINE]Related articlesFree article

A dimensional retrieval model for integrating semantics and statistical evidence in context for genomics literature search.

Urbain J, Goharian N, Frieder O.

Comput Biol Med. 2009 Jan;39(1):61-8. Epub 2009 Jan 15.PMID: 19147128 [PubMed - indexed for MEDLINE]Related articles

Evaluation of Query Expansion Using MeSH in PubMed.

Lu Z, Kim W, Wilbur WJ.

Inf Retr Boston. 2009;12(1):69-80.PMID: 19774223 [PubMed]Related articlesFree article

The value of an in-domain lexicon in genomics qa.

Sasaki Y, McNaught J, Ananiadou S.

J Bioinform Comput Biol. 2010 Feb;8(1):147-61.PMID: 20183880 [PubMed - in process]Related articles

A comparative evaluation of full-text, concept-based, and context-sensitive search.

Moskovitch R, Martins SB, Behiri E, Weiss A, Shahar Y.

J Am Med Inform Assoc. 2007 Mar-Apr;14(2):164-74. Epub 2007 Jan 9.PMID: 17213502 [PubMed - indexed for MEDLINE]Related articlesFree article

An introduction to information retrieval: applications in genomics.

Nadkarni PM.

Pharmacogenomics J. 2002;2(2):96-102. Review.PMID: 12049181 [PubMed - indexed for MEDLINE]Related articles

Overview of the protein-protein interaction annotation extraction task of BioCreative II.

Krallinger M, Leitner F, Rodriguez-Penagos C, Valencia A.

Genome Biol. 2008;9 Suppl 2:S4. Epub 2008 Sep 1.PMID: 18834495 [PubMed - indexed for MEDLINE]Related articlesFree article