PubMed

Protein-lipid interactions: correlation of a predictive algorithm for lipid-binding sites with three-dimensional structural data.

Scott DL, Diez G, Goldmann WH.

Theor Biol Med Model. 2006 Mar 28;3:17.PMID: 16569237 [PubMed - indexed for MEDLINE]Related articlesFree article

The role of hydrophobic interactions in positioning of peripheral proteins in membranes.

Lomize AL, Pogozheva ID, Lomize MA, Mosberg HI.

BMC Struct Biol. 2007 Jun 29;7:44.PMID: 17603894 [PubMed - indexed for MEDLINE]Related articlesFree article

The unfoldomics decade: an update on intrinsically disordered proteins.

Dunker AK, Oldfield CJ, Meng J, Romero P, Yang JY, Chen JW, Vacic V, Obradovic Z, Uversky VN.

BMC Genomics. 2008 Sep 16;9 Suppl 2:S1.PMID: 18831774 [PubMed - indexed for MEDLINE]Related articlesFree article

ProMate: a structure based prediction program to identify the location of protein-protein binding sites.

Neuvirth H, Raz R, Schreiber G.

J Mol Biol. 2004 Apr 16;338(1):181-99.PMID: 15050833 [PubMed - indexed for MEDLINE]Related articles

[The interactions of actin cell and membrane skeleton proteins with lipids]

Bok E, Hryniewicz-Jankowska A, Sikorski AF.

Postepy Biochem. 2009;55(2):207-22. Review. Polish. PMID: 19824478 [PubMed - indexed for MEDLINE]Related articles

The vinculin binding sites of talin and alpha-actinin are sufficient to activate vinculin.

Bois PR, O'Hara BP, Nietlispach D, Kirkpatrick J, Izard T.

J Biol Chem. 2006 Mar 17;281(11):7228-36. Epub 2006 Jan 9.PMID: 16407299 [PubMed - indexed for MEDLINE]Related articlesFree article

Interaction of cytoskeletal proteins with membrane lipids.

Isenberg G, Niggli V.

Int Rev Cytol. 1998;178:73-125. Review.PMID: 9348669 [PubMed - indexed for MEDLINE]Related articles

Controlling cytoskeleton structure by phosphoinositide-protein interactions: phosphoinositide binding protein domains and effects of lipid packing.

Janmey PA, Xian W, Flanagan LA.

Chem Phys Lipids. 1999 Aug;101(1):93-107. Review.PMID: 10810928 [PubMed - indexed for MEDLINE]Related articles

CapZ-lipid membrane interactions: a computer analysis.

Smith J, Diez G, Klemm AH, Schewkunow V, Goldmann WH.

Theor Biol Med Model. 2006 Aug 16;3:30.PMID: 16914033 [PubMed - indexed for MEDLINE]Related articlesFree article

Docking protein domains in contact space.

Lise S, Walker-Taylor A, Jones DT.

BMC Bioinformatics. 2006 Jun 21;7:310.PMID: 16790041 [PubMed - indexed for MEDLINE]Related articlesFree article

Characterization and prediction of protein interfaces to infer protein-protein interaction networks.

Keskin O, Tuncbag N, Gursoy A.

Curr Pharm Biotechnol. 2008 Apr;9(2):67-76. Review.PMID: 18393863 [PubMed - indexed for MEDLINE]Related articles

Characterization of protein-glycolipid recognition at the membrane bilayer.

Evans SV, Roger MacKenzie C.

J Mol Recognit. 1999 May-Jun;12(3):155-68. Review.PMID: 10398406 [PubMed - indexed for MEDLINE]Related articles

A topological algorithm for identification of structural domains of proteins.

Emmert-Streib F, Mushegian A.

BMC Bioinformatics. 2007 Jul 3;8:237.PMID: 17608939 [PubMed - indexed for MEDLINE]Related articlesFree article

Structural properties of lipid-binding sites in cytoskeletal proteins.

Niggli V.

Trends Biochem Sci. 2001 Oct;26(10):604-11. Review.PMID: 11590013 [PubMed - indexed for MEDLINE]Related articles

Prediction of glycolipid-binding domains from the amino acid sequence of lipid raft-associated proteins: application to HpaA, a protein involved in the adhesion of Helicobacter pylori to gastrointestinal cells.

Fantini J, Garmy N, Yahi N.

Biochemistry. 2006 Sep 12;45(36):10957-62.PMID: 16953581 [PubMed - indexed for MEDLINE]Related articles

Analysis of homodimeric protein interfaces by graph-spectral methods.

Brinda KV, Kannan N, Vishveshwara S.

Protein Eng. 2002 Apr;15(4):265-77.PMID: 11983927 [PubMed - indexed for MEDLINE]Related articlesFree article

The fluid mosaic model of the structure of cell membranes.

Singer SJ, Nicolson GL.

Science. 1972 Feb 18;175(23):720-31.PMID: 4333397 [PubMed - indexed for MEDLINE]Related articles

How lipids and proteins interact in a membrane: a molecular approach.

Lee AG.

Mol Biosyst. 2005 Sep;1(3):203-12. Epub 2005 Jul 14. Review.PMID: 16880984 [PubMed - indexed for MEDLINE]Related articlesFree article

Accurate prediction of peptide binding sites on protein surfaces.

Petsalaki E, Stark A, García-Urdiales E, Russell RB.

PLoS Comput Biol. 2009 Mar;5(3):e1000335. Epub 2009 Mar 27.PMID: 19325869 [PubMed - indexed for MEDLINE]Related articlesFree article

Predicting residue-wise contact orders in proteins by support vector regression.

Song J, Burrage K.

BMC Bioinformatics. 2006 Oct 3;7:425.PMID: 17014735 [PubMed - indexed for MEDLINE]Related articlesFree article