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Protein cleavage strategies for an improved analysis of the membrane proteome.

Fischer F, Poetsch A.

Proteome Sci. 2006 Mar 2;4:2.PMID: 16512920 [PubMed]Related articlesFree article

Toward the complete membrane proteome: high coverage of integral membrane proteins through transmembrane peptide detection.

Fischer F, Wolters D, Rögner M, Poetsch A.

Mol Cell Proteomics. 2006 Mar;5(3):444-53. Epub 2005 Nov 16.PMID: 16291997 [PubMed - indexed for MEDLINE]Related articlesFree article

Chemical cleavage-assisted tryptic digestion for membrane proteome analysis.

Iwasaki M, Masuda T, Tomita M, Ishihama Y.

J Proteome Res. 2009 Jun;8(6):3169-75.PMID: 19348461 [PubMed - indexed for MEDLINE]Related articles

High-throughput analysis of rat liver plasma membrane proteome by a nonelectrophoretic in-gel tryptic digestion coupled with mass spectrometry identification.

Cao R, He Q, Zhou J, He Q, Liu Z, Wang X, Chen P, Xie J, Liang S.

J Proteome Res. 2008 Feb;7(2):535-45. Epub 2008 Jan 1.PMID: 18166008 [PubMed - indexed for MEDLINE]Related articles

Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.

Mitra SK, Gantt JA, Ruby JF, Clouse SD, Goshe MB.

J Proteome Res. 2007 May;6(5):1933-50. Epub 2007 Apr 14.PMID: 17432890 [PubMed - indexed for MEDLINE]Related articles

Proteomic analysis of acidic chaperones, and stress proteins in extreme halophile Halobacterium NRC-1: a comparative proteomic approach to study heat shock response.

Shukla HD.

Proteome Sci. 2006 Apr 19;4:6.PMID: 16623945 [PubMed]Related articlesFree article

Response of the cytoplasmic and membrane proteome of Corynebacterium glutamicum ATCC 13032 to pH changes.

Barriuso-Iglesias M, Schluesener D, Barreiro C, Poetsch A, Martín JF.

BMC Microbiol. 2008 Dec 17;8:225.PMID: 19091079 [PubMed - indexed for MEDLINE]Related articlesFree article

Evaluation of the possible proteomic application of trypsin from Streptomyces griseus.

Stosová T, Sebela M, Rehulka P, Sedo O, Havlis J, Zdráhal Z.

Anal Biochem. 2008 May 1;376(1):94-102. Epub 2008 Jan 18.PMID: 18261455 [PubMed - indexed for MEDLINE]Related articles

A proteomic study of Corynebacterium glutamicum AAA+ protease FtsH.

Lüdke A, Krämer R, Burkovski A, Schluesener D, Poetsch A.

BMC Microbiol. 2007 Jan 25;7:6.PMID: 17254330 [PubMed - indexed for MEDLINE]Related articlesFree article

Development and application of a two-phase, on-membrane digestion method in the analysis of membrane proteome.

Zhou J, Lin Y, Deng X, Shen J, He Q, Chen P, Wang X, Liang S.

J Proteome Res. 2008 Apr;7(4):1778-83. Epub 2008 Feb 29.PMID: 18307299 [PubMed - indexed for MEDLINE]Related articles

Characterization of the rat liver membrane proteome using peptide immobilized pH gradient isoelectric focusing.

Chick JM, Haynes PA, Molloy MP, Bjellqvist B, Baker MS, Len AC.

J Proteome Res. 2008 Mar;7(3):1036-45. Epub 2008 Jan 23.PMID: 18211008 [PubMed - indexed for MEDLINE]Related articles

An efficient organic solvent based extraction method for the proteomic analysis of Arabidopsis plasma membranes.

Mitra SK, Walters BT, Clouse SD, Goshe MB.

J Proteome Res. 2009 Jun;8(6):2752-67.PMID: 19334764 [PubMed - indexed for MEDLINE]Related articles

Phase transfer surfactant-aided trypsin digestion for membrane proteome analysis.

Masuda T, Tomita M, Ishihama Y.

J Proteome Res. 2008 Feb;7(2):731-40.PMID: 18183947 [PubMed - indexed for MEDLINE]Related articles

Spatial differences in an integral membrane proteome detected in laser capture microdissected samples.

Wang Z, Han J, Schey KL.

J Proteome Res. 2008 Jul;7(7):2696-702. Epub 2008 May 20.PMID: 18489132 [PubMed - indexed for MEDLINE]Related articlesFree article

LocateP: genome-scale subcellular-location predictor for bacterial proteins.

Zhou M, Boekhorst J, Francke C, Siezen RJ.

BMC Bioinformatics. 2008 Mar 27;9:173.PMID: 18371216 [PubMed - indexed for MEDLINE]Related articlesFree article

A straightforward and highly efficient precipitation/on-pellet digestion procedure coupled with a long gradient nano-LC separation and Orbitrap mass spectrometry for label-free expression profiling of the swine heart mitochondrial proteome.

Duan X, Young R, Straubinger RM, Page B, Cao J, Wang H, Yu H, Canty JM, Qu J.

J Proteome Res. 2009 Jun;8(6):2838-50.PMID: 19290621 [PubMed - indexed for MEDLINE]Related articlesFree article

Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS.

Zhang N, Chen R, Young N, Wishart D, Winter P, Weiner JH, Li L.

Proteomics. 2007 Feb;7(4):484-93.PMID: 17309111 [PubMed - indexed for MEDLINE]Related articles

The two-phase partitioning system--a powerful technique to purify integral membrane proteins of Corynebacterium glutamicum for quantitative shotgun analysis.

Fränzel B, Fischer F, Trötschel C, Poetsch A, Wolters D.

Proteomics. 2009 Apr;9(8):2263-72.PMID: 19322788 [PubMed - indexed for MEDLINE]Related articles

Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin.

Almén MS, Nordström KJ, Fredriksson R, Schiöth HB.

BMC Biol. 2009 Aug 13;7:50.PMID: 19678920 [PubMed - indexed for MEDLINE]Related articlesFree article

Improved identification of membrane proteins by MALDI-TOF MS/MS using vacuum sublimated matrix spots on an ultraphobic chip surface.

Poetsch A, Schlüsener D, Florizone C, Eltis L, Menzel C, Rögner M, Steinert K, Roth U.

J Biomol Tech. 2008 Apr;19(2):129-38.PMID: 19137096 [PubMed - indexed for MEDLINE]Related articlesFree article