PubMed

Challenging the spliceosome machine.

Weir M, Eaton M, Rice M.

Genome Biol. 2006;7(1):R3. Epub 2006 Jan 17.PMID: 16507135 [PubMed - indexed for MEDLINE]Related articlesFree article

Ordered partitioning reveals extended splice-site consensus information.

Weir M, Rice M.

Genome Res. 2004 Jan;14(1):67-78.PMID: 14707171 [PubMed - indexed for MEDLINE]Related articlesFree article

Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns.

Dewey CN, Rogozin IB, Koonin EV.

BMC Genomics. 2006 Dec 8;7:311.PMID: 17156453 [PubMed - indexed for MEDLINE]Related articlesFree article

Computational analysis of splicing errors and mutations in human transcripts.

Kurmangaliyev YZ, Gelfand MS.

BMC Genomics. 2008 Jan 14;9:13.PMID: 18194514 [PubMed - indexed for MEDLINE]Related articlesFree article

Features of spliceosome evolution and function inferred from an analysis of the information at human splice sites.

Stephens RM, Schneider TD.

J Mol Biol. 1992 Dec 20;228(4):1124-36.PMID: 1474582 [PubMed - indexed for MEDLINE]Related articles

Evidence of splice signal migration from exon to intron during intron evolution.

Sverdlov AV, Rogozin IB, Babenko VN, Koonin EV.

Curr Biol. 2003 Dec 16;13(24):2170-4.PMID: 14680632 [PubMed - indexed for MEDLINE]Related articles

Splicing of constitutive upstream introns is essential for the recognition of intra-exonic suboptimal splice sites in the thrombopoietin gene.

Romano M, Marcucci R, Baralle FE.

Nucleic Acids Res. 2001 Feb 15;29(4):886-94.PMID: 11160920 [PubMed - indexed for MEDLINE]Related articlesFree article

The human XPG gene: gene architecture, alternative splicing and single nucleotide polymorphisms.

Emmert S, Schneider TD, Khan SG, Kraemer KH.

Nucleic Acids Res. 2001 Apr 1;29(7):1443-52.PMID: 11266544 [PubMed - indexed for MEDLINE]Related articlesFree article

RNA-protein interactions that regulate pre-mRNA splicing.

Singh R.

Gene Expr. 2002;10(1-2):79-92. Review.PMID: 11868989 [PubMed - indexed for MEDLINE]Related articles

Categorization and characterization of transcript-confirmed constitutively and alternatively spliced introns and exons from human.

Clark F, Thanaraj TA.

Hum Mol Genet. 2002 Feb 15;11(4):451-64.PMID: 11854178 [PubMed - indexed for MEDLINE]Related articlesFree article

The spliceosome: a self-organized macromolecular machine in the nucleus?

Rino J, Carmo-Fonseca M.

Trends Cell Biol. 2009 Aug;19(8):375-84. Epub 2009 Jul 17. Review.PMID: 19616950 [PubMed - indexed for MEDLINE]Related articles

Thermodynamic modeling of donor splice site recognition in pre-mRNA.

Garland JA, Aalberts DP.

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Apr;69(4 Pt 1):041903. Epub 2004 Apr 26. Erratum in: Phys Rev E Stat Nonlin Soft Matter Phys. 2004 May;69(5 Pt 2):059903. PMID: 15169039 [PubMed - indexed for MEDLINE]Related articles

High frequency of the IVS2-2A>G DNA sequence variation in SLC26A5, encoding the cochlear motor protein prestin, precludes its involvement in hereditary hearing loss.

Tang HY, Xia A, Oghalai JS, Pereira FA, Alford RL.

BMC Med Genet. 2005 Aug 8;6:30.PMID: 16086836 [PubMed - indexed for MEDLINE]Related articlesFree article

Bimolecular exon ligation by the human spliceosome.

Anderson K, Moore MJ.

Science. 1997 Jun 13;276(5319):1712-6.PMID: 9180084 [PubMed - indexed for MEDLINE]Related articlesFree article

Spliceosome assembly pathways for different types of alternative splicing converge during commitment to splice site pairing in the A complex.

Kotlajich MV, Crabb TL, Hertel KJ.

Mol Cell Biol. 2009 Feb;29(4):1072-82. Epub 2008 Dec 8.PMID: 19064642 [PubMed - indexed for MEDLINE]Related articlesFree article

The human XPC DNA repair gene: arrangement, splice site information content and influence of a single nucleotide polymorphism in a splice acceptor site on alternative splicing and function.

Khan SG, Muniz-Medina V, Shahlavi T, Baker CC, Inui H, Ueda T, Emmert S, Schneider TD, Kraemer KH.

Nucleic Acids Res. 2002 Aug 15;30(16):3624-31.PMID: 12177305 [PubMed - indexed for MEDLINE]Related articlesFree article

Information for the Coordinates of Exons (ICE): a human splice sites database.

Chong A, Zhang G, Bajic VB.

Genomics. 2004 Oct;84(4):762-6.PMID: 15475254 [PubMed - indexed for MEDLINE]Related articles

An intronic enhancer regulates splicing of the twintron of Drosophila melanogaster prospero pre-mRNA by two different spliceosomes.

Scamborova P, Wong A, Steitz JA.

Mol Cell Biol. 2004 Mar;24(5):1855-69.PMID: 14966268 [PubMed - indexed for MEDLINE]Related articlesFree article

Analysis of canonical and non-canonical splice sites in mammalian genomes.

Burset M, Seledtsov IA, Solovyev VV.

Nucleic Acids Res. 2000 Nov 1;28(21):4364-75.PMID: 11058137 [PubMed - indexed for MEDLINE]Related articlesFree article

Messenger RNA reprogramming by spliceosome-mediated RNA trans-splicing.

Garcia-Blanco MA.

J Clin Invest. 2003 Aug;112(4):474-80. Review.PMID: 12925685 [PubMed - indexed for MEDLINE]Related articlesFree article