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    Results: 1 to 20 of 250

    1.

    Microarray image analysis: background estimation using quantile and morphological filters.

    Bengtsson A, Bengtsson H.

    BMC Bioinformatics. 2006 Feb 28;7:96.PMID: 16504173 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Genes expression level quantification using a spot-based algorithmic pipeline.

    Daskalakis A, Cavouras D, Bougioukos P, Kostopoulos S, Georgiadis P, Kalatzis I, Kagadis G, Nikiforidis G.

    Conf Proc IEEE Eng Med Biol Soc. 2007;2007:1148-51.PMID: 18002165 [PubMed - indexed for MEDLINE]Related articles

    3.

    Automatic analysis of DNA microarray images using mathematical morphology.

    Angulo J, Serra J.

    Bioinformatics. 2003 Mar 22;19(5):553-62.PMID: 12651712 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Bias in error estimation when using cross-validation for model selection.

    Varma S, Simon R.

    BMC Bioinformatics. 2006 Feb 23;7:91.PMID: 16504092 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Donuts, scratches and blanks: robust model-based segmentation of microarray images.

    Li Q, Fraley C, Bumgarner RE, Yeung KY, Raftery AE.

    Bioinformatics. 2005 Jun 15;21(12):2875-82. Epub 2005 Apr 21.PMID: 15845656 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    Improving gene quantification by adjustable spot-image restoration.

    Daskalakis A, Cavouras D, Bougioukos P, Kostopoulos S, Glotsos D, Kalatzis I, Kagadis GC, Argyropoulos C, Nikiforidis G.

    Bioinformatics. 2007 Sep 1;23(17):2265-72. Epub 2007 Jun 28.PMID: 17599935 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Improved variance estimation of classification performance via reduction of bias caused by small sample size.

    Wickenberg-Bolin U, Göransson H, Fryknäs M, Gustafsson MG, Isaksson A.

    BMC Bioinformatics. 2006 Mar 13;7:127.PMID: 16533392 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    A robust neural networks approach for spatial and intensity-dependent normalization of cDNA microarray data.

    Tarca AL, Cooke JE, Mackay J.

    Bioinformatics. 2005 Jun 1;21(11):2674-83. Epub 2005 Mar 29.PMID: 15797913 [PubMed - indexed for MEDLINE]Related articlesFree article

    9.

    Hybrid clustering for microarray image analysis combining intensity and shape features.

    Rahnenführer J, Bozinov D.

    BMC Bioinformatics. 2004 Apr 29;5:47.PMID: 15117421 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    An algorithm for automatic evaluation of the spot quality in two-color DNA microarray experiments.

    Novikov E, Barillot E.

    BMC Bioinformatics. 2005 Dec 9;6:293.PMID: 16336688 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Microarray segmentation methods significantly influence data precision.

    Ahmed AA, Vias M, Iyer NG, Caldas C, Brenton JD.

    Nucleic Acids Res. 2004 Mar 17;32(5):e50.PMID: 15028803 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Which is better for cDNA-microarray-based classification: ratios or direct intensities.

    Attoor S, Dougherty ER, Chen Y, Bittner ML, Trent JM.

    Bioinformatics. 2004 Nov 1;20(16):2513-20. Epub 2004 Sep 28.PMID: 15454406 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    ELB-Q: a new method for improving the robustness in DNA microarray image quantification.

    Ma MQ, Zhang K, Wang HY, Shih FY.

    IEEE Trans Inf Technol Biomed. 2007 Sep;11(5):574-82.PMID: 17912974 [PubMed - indexed for MEDLINE]Related articles

    14.

    Characterisation and correction of signal fluctuations in successive acquisitions of microarray images.

    Glatigny A, Delacroix H, Tang T, François N, Aggerbeck L, Mucchielli-Giorgi MH.

    BMC Bioinformatics. 2009 Mar 30;10:98.PMID: 19331668 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Improving the statistical detection of regulated genes from microarray data using intensity-based variance estimation.

    Comander J, Natarajan S, Gimbrone MA Jr, García-Cardeña G.

    BMC Genomics. 2004 Feb 27;5(1):17.PMID: 15113402 [PubMed - indexed for MEDLINE]Related articlesFree article

    16.

    A unified framework for finding differentially expressed genes from microarray experiments.

    Shaik JS, Yeasin M.

    BMC Bioinformatics. 2007 Sep 18;8:347.PMID: 17877806 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    Stratification bias in low signal microarray studies.

    Parker BJ, Günter S, Bedo J.

    BMC Bioinformatics. 2007 Sep 2;8:326.PMID: 17764577 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    Combinatorial image analysis of DNA microarray features.

    Glasbey CA, Ghazal P.

    Bioinformatics. 2003 Jan 22;19(2):194-203.PMID: 12538239 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    Probabilistic segmentation and intensity estimation for microarray images.

    Gottardo R, Besag J, Stephens M, Murua A.

    Biostatistics. 2006 Jan;7(1):85-99. Epub 2005 Jul 27.PMID: 16049139 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments.

    Sartor MA, Tomlinson CR, Wesselkamper SC, Sivaganesan S, Leikauf GD, Medvedovic M.

    BMC Bioinformatics. 2006 Dec 19;7:538.PMID: 17177995 [PubMed - indexed for MEDLINE]Related articlesFree article

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