PubMed

Rapid and asymmetric divergence of duplicate genes in the human gene coexpression network.

Chung WY, Albert R, Albert I, Nekrutenko A, Makova KD.

BMC Bioinformatics. 2006 Jan 27;7:46.PMID: 16441884 [PubMed - indexed for MEDLINE]Related articlesFree article

Conservation and coevolution in the scale-free human gene coexpression network.

Jordan IK, Mariño-Ramírez L, Wolf YI, Koonin EV.

Mol Biol Evol. 2004 Nov;21(11):2058-70. Epub 2004 Jul 28.PMID: 15282333 [PubMed - indexed for MEDLINE]Related articlesFree article

Divergence in the spatial pattern of gene expression between human duplicate genes.

Makova KD, Li WH.

Genome Res. 2003 Jul;13(7):1638-45.PMID: 12840042 [PubMed - indexed for MEDLINE]Related articlesFree article

Duplicate gene evolution and expression in the wake of vertebrate allopolyploidization.

Chain FJ, Ilieva D, Evans BJ.

BMC Evol Biol. 2008 Feb 8;8:43.PMID: 18261230 [PubMed - indexed for MEDLINE]Related articlesFree article

Rapid evolution of expression and regulatory divergences after yeast gene duplication.

Gu X, Zhang Z, Huang W.

Proc Natl Acad Sci U S A. 2005 Jan 18;102(3):707-12. Epub 2005 Jan 12.PMID: 15647348 [PubMed - indexed for MEDLINE]Related articlesFree article

Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication.

Sato Y, Hashiguchi Y, Nishida M.

BMC Evol Biol. 2009 Jun 5;9:127.PMID: 19500364 [PubMed - indexed for MEDLINE]Related articlesFree article

The role of cis-regulatory motifs and genetical control of expression in the divergence of yeast duplicate genes.

Leach LJ, Zhang Z, Lu C, Kearsey MJ, Luo Z.

Mol Biol Evol. 2007 Nov;24(11):2556-65. Epub 2007 Sep 10.PMID: 17846103 [PubMed - indexed for MEDLINE]Related articlesFree article

Modeling protein network evolution under genome duplication and domain shuffling.

Evlampiev K, Isambert H.

BMC Syst Biol. 2007 Nov 13;1:49.PMID: 17999763 [PubMed - indexed for MEDLINE]Related articlesFree article

Global similarity and local divergence in human and mouse gene co-expression networks.

Tsaparas P, Mariño-Ramírez L, Bodenreider O, Koonin EV, Jordan IK.

BMC Evol Biol. 2006 Sep 12;6:70.PMID: 16968540 [PubMed - indexed for MEDLINE]Related articlesFree article

Asymmetric sequence divergence of duplicate genes.

Conant GC, Wagner A.

Genome Res. 2003 Sep;13(9):2052-8.PMID: 12952876 [PubMed - indexed for MEDLINE]Related articlesFree article

Two patterns of genome organization in mammals: the chromosomal distribution of duplicate genes in human and mouse.

Friedman R, Hughes AL.

Mol Biol Evol. 2004 Jun;21(6):1008-13. Epub 2004 Feb 12.PMID: 14963098 [PubMed - indexed for MEDLINE]Related articlesFree article

Molecular evolution in the yeast transcriptional regulation network.

Evangelisti AM, Wagner A.

J Exp Zool B Mol Dev Evol. 2004 Jul 15;302(4):392-411.PMID: 15287103 [PubMed - indexed for MEDLINE]Related articles

Coding region structural heterogeneity and turnover of transcription start sites contribute to divergence in expression between duplicate genes.

Park C, Makova KD.

Genome Biol. 2009;10(1):R10. Epub 2009 Jan 28.PMID: 19175934 [PubMed - indexed for MEDLINE]Related articlesFree article

Expression divergence between duplicate genes.

Li WH, Yang J, Gu X.

Trends Genet. 2005 Nov;21(11):602-7. Epub 2005 Sep 2. Review.PMID: 16140417 [PubMed - indexed for MEDLINE]Related articles

Upstream plasticity and downstream robustness in evolution of molecular networks.

Maslov S, Sneppen K, Eriksen KA, Yan KK.

BMC Evol Biol. 2004 Mar 8;4:9.PMID: 15070432 [PubMed - indexed for MEDLINE]Related articlesFree article

Role of positive selection in the retention of duplicate genes in mammalian genomes.

Shiu SH, Byrnes JK, Pan R, Zhang P, Li WH.

Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2232-6. Epub 2006 Feb 6.PMID: 16461903 [PubMed - indexed for MEDLINE]Related articlesFree article

Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution.

Blanc G, Wolfe KH.

Plant Cell. 2004 Jul;16(7):1679-91. Epub 2004 Jun 18.PMID: 15208398 [PubMed - indexed for MEDLINE]Related articlesFree article

Position-associated GC asymmetry of gene duplicates.

Rodin SN, Parkhomchuk DV.

J Mol Evol. 2004 Sep;59(3):372-84.PMID: 15553091 [PubMed - indexed for MEDLINE]Related articles

Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.

Prieto C, Risueño A, Fontanillo C, De las Rivas J.

PLoS One. 2008;3(12):e3911. Epub 2008 Dec 15.PMID: 19081792 [PubMed - indexed for MEDLINE]Related articlesFree article

Duplicated genes evolve slower than singletons despite the initial rate increase.

Jordan IK, Wolf YI, Koonin EV.

BMC Evol Biol. 2004 Jul 6;4:22.PMID: 15238160 [PubMed - indexed for MEDLINE]Related articlesFree article