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    Results: 1 to 20 of 131

    1.

    Harshlight: a "corrective make-up" program for microarray chips.

    Suárez-Fariñas M, Pellegrino M, Wittkowski KM, Magnasco MO.

    BMC Bioinformatics. 2005 Dec 10;6:294.PMID: 16336691 [PubMed - indexed for MEDLINE]Related articlesFree article

    2.

    Detecting artifacts on SNP chips.

    Pellegrino M, Suárez-Fariñas M, Magnasco MO, Wittkowski KM.

    Conf Proc IEEE Eng Med Biol Soc. 2006;1:4100-2.PMID: 17947067 [PubMed - indexed for MEDLINE]Related articles

    3.

    "Harshlighting" small blemishes on microarrays.

    Suárez-Fariñas M, Haider A, Wittkowski KM.

    BMC Bioinformatics. 2005 Mar 22;6:65.PMID: 15784152 [PubMed - indexed for MEDLINE]Related articlesFree article

    4.

    Match-only integral distribution (MOID) algorithm for high-density oligonucleotide array analysis.

    Zhou Y, Abagyan R.

    BMC Bioinformatics. 2002;3:3. Epub 2002 Jan 22.PMID: 11835687 [PubMed - indexed for MEDLINE]Related articlesFree article

    5.

    Design and evaluation of Actichip, a thematic microarray for the study of the actin cytoskeleton.

    Muller J, Mehlen A, Vetter G, Yatskou M, Muller A, Chalmel F, Poch O, Friederich E, Vallar L.

    BMC Genomics. 2007 Aug 29;8:294.PMID: 17727702 [PubMed - indexed for MEDLINE]Related articlesFree article

    6.

    A generic approach for the design of whole-genome oligoarrays, validated for genomotyping, deletion mapping and gene expression analysis on Staphylococcus aureus.

    Charbonnier Y, Gettler B, François P, Bento M, Renzoni A, Vaudaux P, Schlegel W, Schrenzel J.

    BMC Genomics. 2005 Jun 17;6:95.PMID: 15963225 [PubMed - indexed for MEDLINE]Related articlesFree article

    7.

    Probe set algorithms: is there a rational best bet?

    Seo J, Hoffman EP.

    BMC Bioinformatics. 2006 Aug 30;7:395.PMID: 16942624 [PubMed - indexed for MEDLINE]Related articlesFree article

    8.

    An automated method for gridding in microarray images.

    Giannakeas N, Fotiadis DI, Politou AS.

    Conf Proc IEEE Eng Med Biol Soc. 2006;1:5876-9.PMID: 17946343 [PubMed - indexed for MEDLINE]Related articles

    9.

    Reducing spatial flaws in oligonucleotide arrays by using neighborhood information.

    Arteaga-Salas JM, Harrison AP, Upton GJ.

    Stat Appl Genet Mol Biol. 2008;7(1):Article29. Epub 2008 Oct 17.PMID: 18976225 [PubMed - indexed for MEDLINE]Related articlesFree article

    10.

    Evaluation of methods for oligonucleotide array data via quantitative real-time PCR.

    Qin LX, Beyer RP, Hudson FN, Linford NJ, Morris DE, Kerr KF.

    BMC Bioinformatics. 2006 Jan 17;7:23.PMID: 16417622 [PubMed - indexed for MEDLINE]Related articlesFree article

    11.

    Correlation test to assess low-level processing of high-density oligonucleotide microarray data.

    Ploner A, Miller LD, Hall P, Bergh J, Pawitan Y.

    BMC Bioinformatics. 2005 Mar 31;6:80.PMID: 15799785 [PubMed - indexed for MEDLINE]Related articlesFree article

    12.

    Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional normalization method.

    Bengtsson H, Hössjer O.

    BMC Bioinformatics. 2006 Mar 1;7:100.PMID: 16509971 [PubMed - indexed for MEDLINE]Related articlesFree article

    13.

    Positional artifacts in microarrays: experimental verification and construction of COP, an automated detection tool.

    Yu H, Nguyen K, Royce T, Qian J, Nelson K, Snyder M, Gerstein M.

    Nucleic Acids Res. 2007;35(2):e8. Epub 2006 Dec 7.PMID: 17158151 [PubMed - indexed for MEDLINE]Related articlesFree article

    14.

    Effects of filtering by Present call on analysis of microarray experiments.

    McClintick JN, Edenberg HJ.

    BMC Bioinformatics. 2006 Jan 31;7:49.PMID: 16448562 [PubMed - indexed for MEDLINE]Related articlesFree article

    15.

    Handling missing DNA microarray data by kriging estimators.

    Pham TD.

    Int J Bioinform Res Appl. 2006;2(2):177-92.PMID: 18048161 [PubMed - indexed for MEDLINE]Related articles

    16.

    Spectral embedding finds meaningful (relevant) structure in image and microarray data.

    Higgs BW, Weller J, Solka JL.

    BMC Bioinformatics. 2006 Feb 16;7:74.PMID: 16483359 [PubMed - indexed for MEDLINE]Related articlesFree article

    17.

    DetectiV: visualization, normalization and significance testing for pathogen-detection microarray data.

    Watson M, Dukes J, Abu-Median AB, King DP, Britton P.

    Genome Biol. 2007;8(9):R190.PMID: 17868443 [PubMed - indexed for MEDLINE]Related articlesFree article

    18.

    SiPaGene: A new repository for instant online retrieval, sharing and meta-analyses of GeneChip expression data.

    Menssen A, Edinger G, Grün JR, Haase U, Baumgrass R, Grützkau A, Radbruch A, Burmester GR, Häupl T.

    BMC Genomics. 2009 Mar 5;10:98.PMID: 19265543 [PubMed - indexed for MEDLINE]Related articlesFree article

    19.

    ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profiles.

    Yoshida R, Higuchi T, Imoto S, Miyano S.

    Bioinformatics. 2006 Jun 15;22(12):1538-9. Epub 2006 Apr 10.PMID: 16606685 [PubMed - indexed for MEDLINE]Related articlesFree article

    20.

    Genome Expression Pathway Analysis Tool--analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context.

    Weniger M, Engelmann JC, Schultz J.

    BMC Bioinformatics. 2007 Jun 2;8:179.PMID: 17543125 [PubMed - indexed for MEDLINE]Related articlesFree article

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