PubMed

Chromatin and siRNA pathways cooperate to maintain DNA methylation of small transposable elements in Arabidopsis.

Tran RK, Zilberman D, de Bustos C, Ditt RF, Henikoff JG, Lindroth AM, Delrow J, Boyle T, Kwong S, Bryson TD, Jacobsen SE, Henikoff S.

Genome Biol. 2005;6(11):R90. Epub 2005 Oct 19.PMID: 16277745 [PubMed - indexed for MEDLINE]Related articlesFree article

Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase.

Ebbs ML, Bender J.

Plant Cell. 2006 May;18(5):1166-76. Epub 2006 Mar 31.PMID: 16582009 [PubMed - indexed for MEDLINE]Related articlesFree article

RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis.

Chan SW, Henderson IR, Zhang X, Shah G, Chien JS, Jacobsen SE.

PLoS Genet. 2006 Jun 2;2(6):e83.PMID: 16741558 [PubMed - indexed for MEDLINE]Related articlesFree article

ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation.

Zilberman D, Cao X, Jacobsen SE.

Science. 2003 Jan 31;299(5607):716-9. Epub 2003 Jan 9.PMID: 12522258 [PubMed - indexed for MEDLINE]Related articlesFree article

Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3.

Lindroth AM, Shultis D, Jasencakova Z, Fuchs J, Johnson L, Schubert D, Patnaik D, Pradhan S, Goodrich J, Schubert I, Jenuwein T, Khorasanizadeh S, Jacobsen SE.

EMBO J. 2004 Oct 27;23(21):4286-96. Epub 2004 Sep 30.PMID: 15457214 [PubMed - indexed for MEDLINE]Related articlesFree article

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase.

Jackson JP, Lindroth AM, Cao X, Jacobsen SE.

Nature. 2002 Apr 4;416(6880):556-60. Epub 2002 Mar 17.PMID: 11898023 [PubMed - indexed for MEDLINE]Related articles

Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification.

Lippman Z, May B, Yordan C, Singer T, Martienssen R.

PLoS Biol. 2003 Dec;1(3):E67. Epub 2003 Dec 22.PMID: 14691539 [PubMed - indexed for MEDLINE]Related articlesFree article

Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.

Zilberman D, Cao X, Johansen LK, Xie Z, Carrington JC, Jacobsen SE.

Curr Biol. 2004 Jul 13;14(13):1214-20.PMID: 15242620 [PubMed - indexed for MEDLINE]Related articles

Silencing of transposons in plant genomes: kick them when they're down.

Zilberman D, Henikoff S.

Genome Biol. 2004;5(12):249. Epub 2004 Nov 16. Review.PMID: 15575975 [PubMed - indexed for MEDLINE]Related articlesFree article

Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation.

Cao X, Aufsatz W, Zilberman D, Mette MF, Huang MS, Matzke M, Jacobsen SE.

Curr Biol. 2003 Dec 16;13(24):2212-7.PMID: 14680640 [PubMed - indexed for MEDLINE]Related articles

Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation.

Johnson L, Cao X, Jacobsen S.

Curr Biol. 2002 Aug 20;12(16):1360-7.PMID: 12194816 [PubMed - indexed for MEDLINE]Related articles

Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading.

Henderson IR, Jacobsen SE.

Genes Dev. 2008 Jun 15;22(12):1597-606.PMID: 18559476 [PubMed - indexed for MEDLINE]Related articlesFree article

Genome-wide profiling of DNA methylation reveals transposon targets of CHROMOMETHYLASE3.

Tompa R, McCallum CM, Delrow J, Henikoff JG, van Steensel B, Henikoff S.

Curr Biol. 2002 Jan 8;12(1):65-8.PMID: 11790305 [PubMed - indexed for MEDLINE]Related articles

Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.

Gendrel AV, Lippman Z, Yordan C, Colot V, Martienssen RA.

Science. 2002 Sep 13;297(5588):1871-3. Epub 2002 Jun 20.PMID: 12077425 [PubMed - indexed for MEDLINE]Related articlesFree article

The SRA methyl-cytosine-binding domain links DNA and histone methylation.

Johnson LM, Bostick M, Zhang X, Kraft E, Henderson I, Callis J, Jacobsen SE.

Curr Biol. 2007 Feb 20;17(4):379-84. Epub 2007 Jan 18.PMID: 17239600 [PubMed - indexed for MEDLINE]Related articlesFree article

H3 lysine 9 methylation is maintained on a transcribed inverted repeat by combined action of SUVH6 and SUVH4 methyltransferases.

Ebbs ML, Bartee L, Bender J.

Mol Cell Biol. 2005 Dec;25(23):10507-15.PMID: 16287862 [PubMed - indexed for MEDLINE]Related articlesFree article

Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing.

Cao X, Jacobsen SE.

Curr Biol. 2002 Jul 9;12(13):1138-44.PMID: 12121623 [PubMed - indexed for MEDLINE]Related articles

Viral genome methylation as an epigenetic defense against geminiviruses.

Raja P, Sanville BC, Buchmann RC, Bisaro DM.

J Virol. 2008 Sep;82(18):8997-9007. Epub 2008 Jul 2.PMID: 18596098 [PubMed - indexed for MEDLINE]Related articlesFree article

Cooperative activity of DNA methyltransferases for maintenance of symmetrical and non-symmetrical cytosine methylation in Arabidopsis thaliana.

Singh A, Zubko E, Meyer P.

Plant J. 2008 Dec;56(5):814-23. Epub 2008 Aug 27.PMID: 18665914 [PubMed - indexed for MEDLINE]Related articlesFree article

Role of transposable elements in heterochromatin and epigenetic control.

Lippman Z, Gendrel AV, Black M, Vaughn MW, Dedhia N, McCombie WR, Lavine K, Mittal V, May B, Kasschau KD, Carrington JC, Doerge RW, Colot V, Martienssen R.

Nature. 2004 Jul 22;430(6998):471-6.PMID: 15269773 [PubMed - indexed for MEDLINE]Related articles