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A rapid and versatile combined DNA/RNA extraction protocol and its application to the analysis of a novel DNA marker set polymorphic between Arabidopsis thaliana ecotypes Col-0 and Landsberg erecta.

Berendzen K, Searle I, Ravenscroft D, Koncz C, Batschauer A, Coupland G, Somssich IE, Ulker B.

Plant Methods. 2005 Aug 23;1(1):4.PMID: 16270938 [PubMed]Related articlesFree article

Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana.

Wittenberg AH, van der Lee T, Cayla C, Kilian A, Visser RG, Schouten HJ.

Mol Genet Genomics. 2005 Aug;274(1):30-9. Epub 2005 Jul 16.PMID: 15937704 [PubMed - indexed for MEDLINE]Related articles

Small RNA-directed epigenetic natural variation in Arabidopsis thaliana.

Zhai J, Liu J, Liu B, Li P, Meyers BC, Chen X, Cao X.

PLoS Genet. 2008 Apr 25;4(4):e1000056.PMID: 18437202 [PubMed - indexed for MEDLINE]Related articlesFree article

High-throughput genetic mapping in Arabidopsis thaliana.

Ponce MR, Robles P, Micol JL.

Mol Gen Genet. 1999 Mar;261(2):408-15.PMID: 10102377 [PubMed - indexed for MEDLINE]Related articles

Variations in CYP74B2 (hydroperoxide lyase) gene expression differentially affect hexenal signaling in the Columbia and Landsberg erecta ecotypes of Arabidopsis.

Duan H, Huang MY, Palacio K, Schuler MA.

Plant Physiol. 2005 Nov;139(3):1529-44. Epub 2005 Oct 28.PMID: 16258015 [PubMed - indexed for MEDLINE]Related articlesFree article

Establishment of a high-efficiency SNP-based framework marker set for Arabidopsis.

Törjék O, Berger D, Meyer RC, Müssig C, Schmid KJ, Rosleff Sörensen T, Weisshaar B, Mitchell-Olds T, Altmann T.

Plant J. 2003 Oct;36(1):122-40.PMID: 12974817 [PubMed - indexed for MEDLINE]Related articles

Protocol: a rapid and economical procedure for purification of plasmid or plant DNA with diverse applications in plant biology.

Li JF, Li L, Sheen J.

Plant Methods. 2010 Jan 14;6(1):1.PMID: 20180960 [PubMed - in process]Related articlesFree article

The Arabidopsis transposable element Tag1 is widely distributed among Arabidopsis ecotypes.

Frank MJ, Preuss D, Mack A, Kuhlmann TC, Crawford NM.

Mol Gen Genet. 1998 Feb;257(4):478-84.PMID: 9529529 [PubMed - indexed for MEDLINE]Related articles

An alternative method to amplify RNA without loss of signal conservation for expression analysis with a proteinase DNA microarray in the ArrayTube format.

Schüler S, Wenz I, Wiederanders B, Slickers P, Ehricht R.

BMC Genomics. 2006 Jun 12;7:144.PMID: 16768788 [PubMed - indexed for MEDLINE]Related articlesFree article

Genetic similarity among Arabidopsis thaliana ecotypes estimated by DNA sequence comparison.

Hardtke CS, Müller J, Berleth T.

Plant Mol Biol. 1996 Dec;32(5):915-22.PMID: 8980542 [PubMed - indexed for MEDLINE]Related articles

Marker development for the genetic study of natural variation in Arabidopsis thaliana.

Nemri A, Neff MM, Burrell M, Jones JD, Studholme DJ.

Bioinformatics. 2007 Nov 15;23(22):3108-9.PMID: 18025007 [PubMed - indexed for MEDLINE]Related articlesFree article

Morphological and physiological traits of three major Arabidopsis thaliana accessions.

Passardi F, Dobias J, Valério L, Guimil S, Penel C, Dunand C.

J Plant Physiol. 2007 Aug;164(8):980-92. Epub 2006 Aug 10.PMID: 16904792 [PubMed - indexed for MEDLINE]Related articles

NEATTILL: A simplified procedure for nucleic acid extraction from arrayed tissue for TILLING and other high-throughput reverse genetic applications.

Sreelakshmi Y, Gupta S, Bodanapu R, Chauhan VS, Hanjabam M, Thomas S, Mohan V, Sharma S, Srinivasan R, Sharma R.

Plant Methods. 2010 Jan 26;6(1):3.PMID: 20181012 [PubMed - in process]Related articlesFree article

High throughput genome-specific and gene-specific molecular markers for erucic acid genes in Brassica napus (L.) for marker-assisted selection in plant breeding.

Rahman M, Sun Z, McVetty PB, Li G.

Theor Appl Genet. 2008 Oct;117(6):895-904. Epub 2008 Jul 17.PMID: 18633592 [PubMed - indexed for MEDLINE]Related articles

Locked nucleic acid pentamers as universal PCR primers for genomic DNA amplification.

Sun Z, Chen Z, Hou X, Li S, Zhu H, Qian J, Lu D, Liu W.

PLoS One. 2008;3(11):e3701. Epub 2008 Nov 11.PMID: 19002243 [PubMed - indexed for MEDLINE]Related articlesFree article

ASAP: amplification, sequencing & annotation of plastomes.

Dhingra A, Folta KM.

BMC Genomics. 2005 Dec 7;6:176.PMID: 16336644 [PubMed - indexed for MEDLINE]Related articlesFree article

DNA markers define plastid haplotypes in Arabidopsis thaliana.

Azhagiri AK, Maliga P.

Curr Genet. 2007 Apr;51(4):269-75. Epub 2007 Jan 26.PMID: 17256171 [PubMed - indexed for MEDLINE]Related articles

DNA-free RNA isolation protocols for Arabidopsis thaliana, including seeds and siliques.

Oñate-Sánchez L, Vicente-Carbajosa J.

BMC Res Notes. 2008 Oct 20;1:93.PMID: 18937828 [PubMed - in process]Related articlesFree article

Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley.

Simková H, Svensson JT, Condamine P, Hribová E, Suchánková P, Bhat PR, Bartos J, Safár J, Close TJ, Dolezel J.

BMC Genomics. 2008 Jun 19;9:294.PMID: 18565235 [PubMed - indexed for MEDLINE]Related articlesFree article

A new set of ESTs and cDNA clones from full-length and normalized libraries for gene discovery and functional characterization in citrus.

Marques MC, Alonso-Cantabrana H, Forment J, Arribas R, Alamar S, Conejero V, Perez-Amador MA.

BMC Genomics. 2009 Sep 11;10:428.PMID: 19747386 [PubMed - indexed for MEDLINE]Related articlesFree article