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    Results: 1 to 20 of 111

    1.

    L2L: a simple tool for discovering the hidden significance in microarray expression data.

    Newman JC, Weiner AM.

    Genome Biol. 2005;6(9):R81. Epub 2005 Aug 31.

    PMID:
    16168088
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Gene Aging Nexus: a web database and data mining platform for microarray data on aging.

    Pan F, Chiu CH, Pulapura S, Mehan MR, Nunez-Iglesias J, Zhang K, Kamath K, Waterman MS, Finch CE, Zhou XJ.

    Nucleic Acids Res. 2007 Jan;35(Database issue):D756-9. Epub 2006 Nov 7.

    PMID:
    17090592
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization.

    Cahan P, Rovegno F, Mooney D, Newman JC, St Laurent G 3rd, McCaffrey TA.

    Gene. 2007 Oct 15;401(1-2):12-8. Epub 2007 Jul 3. Review.

    PMID:
    17651921
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    EzArray: a web-based highly automated Affymetrix expression array data management and analysis system.

    Zhu Y, Zhu Y, Xu W.

    BMC Bioinformatics. 2008 Jan 24;9:46.

    PMID:
    18218103
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    yMGV: a cross-species expression data mining tool.

    Lelandais G, Le Crom S, Devaux F, Vialette S, Church GM, Jacq C, Marc P.

    Nucleic Acids Res. 2004 Jan 1;32(Database issue):D323-5.

    PMID:
    14681424
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    MADNet: microarray database network web server.

    Segota I, Bartonicek N, Vlahovicek K.

    Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W332-5. Epub 2008 May 14.

    PMID:
    18480121
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    GEM-TREND: a web tool for gene expression data mining toward relevant network discovery.

    Feng C, Araki M, Kunimoto R, Tamon A, Makiguchi H, Niijima S, Tsujimoto G, Okuno Y.

    BMC Genomics. 2009 Sep 3;10:411.

    PMID:
    19728865
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Onto-Tools: new additions and improvements in 2006.

    Khatri P, Voichita C, Kattan K, Ansari N, Khatri A, Georgescu C, Tarca AL, Draghici S.

    Nucleic Acids Res. 2007 Jul;35(Web Server issue):W206-11. Epub 2007 Jun 21.

    PMID:
    17584796
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    9.

    WholePathwayScope: a comprehensive pathway-based analysis tool for high-throughput data.

    Yi M, Horton JD, Cohen JC, Hobbs HH, Stephens RM.

    BMC Bioinformatics. 2006 Jan 19;7:30.

    PMID:
    16423281
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    CRSD: a comprehensive web server for composite regulatory signature discovery.

    Liu CC, Lin CC, Chen WS, Chen HY, Chang PC, Chen JJ, Yang PC.

    Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W571-7.

    PMID:
    16845073
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    MADIBA: a web server toolkit for biological interpretation of Plasmodium and plant gene clusters.

    Law PJ, Claudel-Renard C, Joubert F, Louw AI, Berger DK.

    BMC Genomics. 2008 Feb 28;9:105.

    PMID:
    18307768
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    M@IA: a modular open-source application for microarray workflow and integrative datamining.

    Le Béchec A, Zindy P, Sierocinski T, Petritis D, Bihouée A, Le Meur N, Léger J, Théret N.

    In Silico Biol. 2008;8(1):63-9.

    PMID:
    18430991
    [PubMed - indexed for MEDLINE]
    13.

    Mining published lists of cancer related microarray experiments: identification of a gene expression signature having a critical role in cell-cycle control.

    Finocchiaro G, Mancuso F, Muller H.

    BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S14.

    PMID:
    16351740
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    DGEM--a microarray gene expression database for primary human disease tissues.

    Xia Y, Campen A, Rigsby D, Guo Y, Feng X, Su EW, Palakal M, Li S.

    Mol Diagn Ther. 2007;11(3):145-9.

    PMID:
    17570735
    [PubMed - indexed for MEDLINE]
    15.

    The Stanford Microarray Database: implementation of new analysis tools and open source release of software.

    Demeter J, Beauheim C, Gollub J, Hernandez-Boussard T, Jin H, Maier D, Matese JC, Nitzberg M, Wymore F, Zachariah ZK, Brown PO, Sherlock G, Ball CA.

    Nucleic Acids Res. 2007 Jan;35(Database issue):D766-70. Epub 2006 Dec 20.

    PMID:
    17182626
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    NCBI GEO: mining tens of millions of expression profiles--database and tools update.

    Barrett T, Troup DB, Wilhite SE, Ledoux P, Rudnev D, Evangelista C, Kim IF, Soboleva A, Tomashevsky M, Edgar R.

    Nucleic Acids Res. 2007 Jan;35(Database issue):D760-5. Epub 2006 Nov 11.

    PMID:
    17099226
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Harnessing the power of gene microarrays for the study of brain aging and Alzheimer's disease: statistical reliability and functional correlation.

    Blalock EM, Chen KC, Stromberg AJ, Norris CM, Kadish I, Kraner SD, Porter NM, Landfield PW.

    Ageing Res Rev. 2005 Nov;4(4):481-512. Epub 2005 Oct 27. Review.

    PMID:
    16257272
    [PubMed - indexed for MEDLINE]
    18.

    CoPub: a literature-based keyword enrichment tool for microarray data analysis.

    Frijters R, Heupers B, van Beek P, Bouwhuis M, van Schaik R, de Vlieg J, Polman J, Alkema W.

    Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W406-10. Epub 2008 Apr 28.

    PMID:
    18442992
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    BiologicalNetworks: visualization and analysis tool for systems biology.

    Baitaluk M, Sedova M, Ray A, Gupta A.

    Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W466-71.

    PMID:
    16845051
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    20.

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