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    Results: 1 to 20 of 98

    1.

    Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals.

    Chamary JV, Hurst LD.

    Genome Biol. 2005;6(9):R75. Epub 2005 Aug 16.

    PMID:
    16168082
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    3.

    Hearing silence: non-neutral evolution at synonymous sites in mammals.

    Chamary JV, Parmley JL, Hurst LD.

    Nat Rev Genet. 2006 Feb;7(2):98-108. Review.

    PMID:
    16418745
    [PubMed - indexed for MEDLINE]
    4.

    Preliminary assessment of the impact of microRNA-mediated regulation on coding sequence evolution in mammals.

    Hurst LD.

    J Mol Evol. 2006 Aug;63(2):174-82. Epub 2006 Jun 16.

    PMID:
    16786435
    [PubMed - indexed for MEDLINE]
    5.

    A periodic pattern of mRNA secondary structure created by the genetic code.

    Shabalina SA, Ogurtsov AY, Spiridonov NA.

    Nucleic Acids Res. 2006 May 8;34(8):2428-37. Print 2006.

    PMID:
    16682450
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Relationship between mRNA secondary structure and sequence variability in Chloroplast genes: possible life history implications.

    Krishnan NM, Seligmann H, Rao BJ.

    BMC Genomics. 2008 Jan 28;9:48.

    PMID:
    18226235
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Evidence for purifying selection against synonymous mutations in mammalian exonic splicing enhancers.

    Parmley JL, Chamary JV, Hurst LD.

    Mol Biol Evol. 2006 Feb;23(2):301-9. Epub 2005 Oct 12.

    PMID:
    16221894
    [PubMed - indexed for MEDLINE]
    Free Article
    8.

    Positive selection at sites of multiple amino acid replacements since rat-mouse divergence.

    Bazykin GA, Kondrashov FA, Ogurtsov AY, Sunyaev S, Kondrashov AS.

    Nature. 2004 Jun 3;429(6991):558-62.

    PMID:
    15175752
    [PubMed - indexed for MEDLINE]
    9.

    Extensive purifying selection acting on synonymous sites in HIV-1 Group M sequences.

    Ngandu NK, Scheffler K, Moore P, Woodman Z, Martin D, Seoighe C.

    Virol J. 2008 Dec 23;5:160. Review.

    PMID:
    19105834
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    10.

    Widespread positive selection in synonymous sites of mammalian genes.

    Resch AM, Carmel L, Mariño-Ramírez L, Ogurtsov AY, Shabalina SA, Rogozin IB, Koonin EV.

    Mol Biol Evol. 2007 Aug;24(8):1821-31. Epub 2007 May 23.

    PMID:
    17522087
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    11.

    The effect of tandem substitutions on the correlation between synonymous and nonsynonymous rates in rodents.

    Smith NG, Hurst LD.

    Genetics. 1999 Nov;153(3):1395-402.

    PMID:
    10545467
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Weak selection and recent mutational changes influence polymorphic synonymous mutations in humans.

    Comeron JM.

    Proc Natl Acad Sci U S A. 2006 May 2;103(18):6940-5. Epub 2006 Apr 21.

    PMID:
    16632609
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Synonymous mutations in the human dopamine receptor D2 (DRD2) affect mRNA stability and synthesis of the receptor.

    Duan J, Wainwright MS, Comeron JM, Saitou N, Sanders AR, Gelernter J, Gejman PV.

    Hum Mol Genet. 2003 Feb 1;12(3):205-16.

    PMID:
    12554675
    [PubMed - indexed for MEDLINE]
    Free Article
    15.

    Selection in favor of nucleotides G and C diversifies evolution rates and levels of polymorphism at mammalian synonymous sites.

    Kondrashov FA, Ogurtsov AY, Kondrashov AS.

    J Theor Biol. 2006 Jun 21;240(4):616-26. Epub 2005 Dec 15.

    PMID:
    16343547
    [PubMed - indexed for MEDLINE]
    16.

    Patterns of mutation and selection at synonymous sites in Drosophila.

    Singh ND, Bauer DuMont VL, Hubisz MJ, Nielsen R, Aquadro CF.

    Mol Biol Evol. 2007 Dec;24(12):2687-97. Epub 2007 Nov 13.

    PMID:
    18000010
    [PubMed - indexed for MEDLINE]
    Free Article
    17.

    How common are intragene windows with KA > KS owing to purifying selection on synonymous mutations?

    Parmley JL, Hurst LD.

    J Mol Evol. 2007 Jun;64(6):646-55. Epub 2007 Jun 7.

    PMID:
    17557167
    [PubMed - indexed for MEDLINE]
    18.

    "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons.

    Shields DC, Sharp PM, Higgins DG, Wright F.

    Mol Biol Evol. 1988 Nov;5(6):704-16.

    PMID:
    3146682
    [PubMed - indexed for MEDLINE]
    19.

    Selective pressures at a codon-level predict deleterious mutations in human disease genes.

    Arbiza L, Duchi S, Montaner D, Burguet J, Pantoja-Uceda D, Pineda-Lucena A, Dopazo J, Dopazo H.

    J Mol Biol. 2006 May 19;358(5):1390-404. Epub 2006 Mar 15.

    PMID:
    16584746
    [PubMed - indexed for MEDLINE]
    20.

    Final Report on Carcinogens Background Document for Styrene.

    National Toxicology Program.

    Rep Carcinog Backgr Doc. 2008 Sep;(8-5978):i-398.

    PMID:
    20737009
    [PubMed - as supplied by publisher]

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