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    Results: 1 to 20 of 190

    1.

    Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome.

    Ramani AK, Bunescu RC, Mooney RJ, Marcotte EM.

    Genome Biol. 2005;6(5):R40. Epub 2005 Apr 15.

    PMID:
    15892868
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    2.

    Comparison of human protein-protein interaction maps.

    Futschik ME, Chaurasia G, Herzel H.

    Bioinformatics. 2007 Mar 1;23(5):605-11. Epub 2007 Jan 19.

    PMID:
    17237052
    [PubMed - indexed for MEDLINE]
    Free Article
    3.

    Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks.

    Daraselia N, Yuryev A, Egorov S, Mazo I, Ispolatov I.

    BMC Bioinformatics. 2007 Jul 10;8:243.

    PMID:
    17620146
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    4.

    Probabilistic prediction and ranking of human protein-protein interactions.

    Scott MS, Barton GJ.

    BMC Bioinformatics. 2007 Jul 5;8:239.

    PMID:
    17615067
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    5.

    A first-draft human protein-interaction map.

    Lehner B, Fraser AG.

    Genome Biol. 2004;5(9):R63. Epub 2004 Aug 13.

    PMID:
    15345047
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    6.

    Reconstruction of human protein interolog network using evolutionary conserved network.

    Huang TW, Lin CY, Kao CY.

    BMC Bioinformatics. 2007 May 10;8:152.

    PMID:
    17493278
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    7.

    Improving protein function prediction methods with integrated literature data.

    Gabow AP, Leach SM, Baumgartner WA, Hunter LE, Goldberg DS.

    BMC Bioinformatics. 2008 Apr 15;9:198.

    PMID:
    18412966
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    8.

    Computational analysis of human protein interaction networks.

    Ramírez F, Schlicker A, Assenov Y, Lengauer T, Albrecht M.

    Proteomics. 2007 Aug;7(15):2541-52.

    PMID:
    17647236
    [PubMed - indexed for MEDLINE]
    9.

    Discovering disease-genes by topological features in human protein-protein interaction network.

    Xu J, Li Y.

    Bioinformatics. 2006 Nov 15;22(22):2800-5. Epub 2006 Sep 5.

    PMID:
    16954137
    [PubMed - indexed for MEDLINE]
    Free Article
    10.

    The Cartographers toolbox: building bigger and better human protein interaction networks.

    Sanderson CM.

    Brief Funct Genomic Proteomic. 2009 Jan;8(1):1-11. Epub 2009 Mar 12. Review.

    PMID:
    19282470
    [PubMed - indexed for MEDLINE]
    Free Article
    11.

    Coverage and error models of protein-protein interaction data by directed graph analysis.

    Chiang T, Scholtens D, Sarkar D, Gentleman R, Huber W.

    Genome Biol. 2007;8(9):R186.

    PMID:
    17845715
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    12.

    Ontological visualization of protein-protein interactions.

    Drabkin HJ, Hollenbeck C, Hill DP, Blake JA.

    BMC Bioinformatics. 2005 Feb 11;6:29.

    PMID:
    15707487
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    13.

    False positive reduction in protein-protein interaction predictions using gene ontology annotations.

    Mahdavi MA, Lin YH.

    BMC Bioinformatics. 2007 Jul 23;8:262.

    PMID:
    17645798
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    14.

    Computational approaches to protein-protein interaction.

    Franzot G, Carugo O.

    J Struct Funct Genomics. 2003;4(4):245-55.

    PMID:
    15185965
    [PubMed - indexed for MEDLINE]
    15.

    MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data.

    Chatr-aryamontri A, Kerrien S, Khadake J, Orchard S, Ceol A, Licata L, Castagnoli L, Costa S, Derow C, Huntley R, Aranda B, Leroy C, Thorneycroft D, Apweiler R, Cesareni G, Hermjakob H.

    Genome Biol. 2008;9 Suppl 2:S5. Epub 2008 Sep 1.

    PMID:
    18834496
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    16.

    Exploiting amino acid composition for predicting protein-protein interactions.

    Roy S, Martinez D, Platero H, Lane T, Werner-Washburne M.

    PLoS One. 2009 Nov 20;4(11):e7813.

    PMID:
    19936254
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    17.

    Interaction networks: from protein functions to drug discovery. A review.

    Chautard E, Thierry-Mieg N, Ricard-Blum S.

    Pathol Biol (Paris). 2009 Jun;57(4):324-33. Epub 2008 Dec 13. Review.

    PMID:
    19070972
    [PubMed - indexed for MEDLINE]
    18.

    RRW: repeated random walks on genome-scale protein networks for local cluster discovery.

    Macropol K, Can T, Singh AK.

    BMC Bioinformatics. 2009 Sep 9;10:283.

    PMID:
    19740439
    [PubMed - indexed for MEDLINE]
    Free PMC Article
    19.

    The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.

    Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, Lappe M, Li Y, Zeng R, Rana D, Nikolski M, Husi H, Brun C, Shanker K, Grant SG, Sander C, Bork P, Zhu W, Pandey A, Brazma A, Jacq B, Vidal M, Sherman D, Legrain P, Cesareni G, Xenarios I, Eisenberg D, Steipe B, Hogue C, Apweiler R.

    Nat Biotechnol. 2004 Feb;22(2):177-83.

    PMID:
    14755292
    [PubMed - indexed for MEDLINE]
    20.

    Mining Alzheimer disease relevant proteins from integrated protein interactome data.

    Chen JY, Shen C, Sivachenko AY.

    Pac Symp Biocomput. 2006:367-78.

    PMID:
    17094253
    [PubMed - indexed for MEDLINE]
    Free Article

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