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A database for G proteins and their interaction with GPCRs.

Elefsinioti AL, Bagos PG, Spyropoulos IC, Hamodrakas SJ.

BMC Bioinformatics. 2004 Dec 24;5:208.PMID: 15619328 [PubMed - indexed for MEDLINE]Related articlesFree article

gpDB: a database of GPCRs, G-proteins, effectors and their interactions.

Theodoropoulou MC, Bagos PG, Spyropoulos IC, Hamodrakas SJ.

Bioinformatics. 2008 Jun 15;24(12):1471-2. Epub 2008 Apr 25.PMID: 18441001 [PubMed - indexed for MEDLINE]Related articlesFree article

A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models.

Sgourakis NG, Bagos PG, Papasaikas PK, Hamodrakas SJ.

BMC Bioinformatics. 2005 Apr 22;6:104.PMID: 15847681 [PubMed - indexed for MEDLINE]Related articlesFree article

Prediction of the coupling specificity of GPCRs to four families of G-proteins using hidden Markov models and artificial neural networks.

Sgourakis NG, Bagos PG, Hamodrakas SJ.

Bioinformatics. 2005 Nov 15;21(22):4101-6. Epub 2005 Sep 20.PMID: 16174684 [PubMed - indexed for MEDLINE]Related articlesFree article

GLIDA: GPCR--ligand database for chemical genomics drug discovery--database and tools update.

Okuno Y, Tamon A, Yabuuchi H, Niijima S, Minowa Y, Tonomura K, Kunimoto R, Feng C.

Nucleic Acids Res. 2008 Jan;36(Database issue):D907-12. Epub 2007 Nov 5.PMID: 17986454 [PubMed - indexed for MEDLINE]Related articlesFree article

SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces.

Teyra J, Doms A, Schroeder M, Pisabarro MT.

BMC Bioinformatics. 2006 Mar 2;7:104.PMID: 16512892 [PubMed - indexed for MEDLINE]Related articlesFree article

Prediction of GPCR-G protein coupling specificity using features of sequences and biological functions.

Ono T, Hishigaki H.

Genomics Proteomics Bioinformatics. 2006 Nov;4(4):238-44.PMID: 17531799 [PubMed - indexed for MEDLINE]Related articles

Requirements and ontology for a G protein-coupled receptor oligomerization knowledge base.

Skrabanek L, Murcia M, Bouvier M, Devi L, George SR, Lohse MJ, Milligan G, Neubig R, Palczewski K, Parmentier M, Pin JP, Vriend G, Javitch JA, Campagne F, Filizola M.

BMC Bioinformatics. 2007 May 30;8:177.PMID: 17537266 [PubMed - indexed for MEDLINE]Related articlesFree article

GLIDA: GPCR-ligand database for chemical genomic drug discovery.

Okuno Y, Yang J, Taneishi K, Yabuuchi H, Tsujimoto G.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D673-7.PMID: 16381956 [PubMed - indexed for MEDLINE]Related articlesFree article

RINGdb: an integrated database for G protein-coupled receptors and regulators of G protein signaling.

Fang YC, Sun WH, Wu LC, Huang HD, Juan HF, Horng JT.

BMC Genomics. 2006 Dec 16;7:317.PMID: 17173697 [PubMed - indexed for MEDLINE]Related articlesFree article

PRED-GPCR: GPCR recognition and family classification server.

Papasaikas PK, Bagos PG, Litou ZI, Promponas VJ, Hamodrakas SJ.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W380-2.PMID: 15215415 [PubMed - indexed for MEDLINE]Related articlesFree article

Evolutionary relationships among G protein-coupled receptors using a clustered database approach.

Graul RC, Sadée W.

AAPS PharmSci. 2001;3(2):E12.PMID: 11741263 [PubMed - indexed for MEDLINE]Related articlesFree article

Predicting the coupling specificity of GPCRs to G-proteins by support vector machines.

Guan CP, Jiang ZR, Zhou YH.

Genomics Proteomics Bioinformatics. 2005 Nov;3(4):247-51.PMID: 16689694 [PubMed - indexed for MEDLINE]Related articles

Real-time monitoring of receptor and G-protein interactions in living cells.

Galés C, Rebois RV, Hogue M, Trieu P, Breit A, Hébert TE, Bouvier M.

Nat Methods. 2005 Mar;2(3):177-84. Epub 2005 Feb 17.PMID: 15782186 [PubMed - indexed for MEDLINE]Related articles

GPCR NaVa database: natural variants in human G protein-coupled receptors.

Kazius J, Wurdinger K, van Iterson M, Kok J, Bäck T, Ijzerman AP.

Hum Mutat. 2008 Jan;29(1):39-44.PMID: 17924574 [PubMed - indexed for MEDLINE]Related articles

GRIFFIN: a system for predicting GPCR-G-protein coupling selectivity using a support vector machine and a hidden Markov model.

Yabuki Y, Muramatsu T, Hirokawa T, Mukai H, Suwa M.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W148-53.PMID: 15980445 [PubMed - indexed for MEDLINE]Related articlesFree article

Structure modeling of all identified G protein-coupled receptors in the human genome.

Zhang Y, Devries ME, Skolnick J.

PLoS Comput Biol. 2006 Feb;2(2):e13. Epub 2006 Feb 17. Erratum in: PLoS Comput Biol. 2006 Mar;2(3):e29. PMID: 16485037 [PubMed - indexed for MEDLINE]Related articlesFree article

A novel method for GPCR recognition and family classification from sequence alone using signatures derived from profile hidden Markov models.

Papasaikas PK, Bagos PG, Litou ZI, Hamodrakas SJ.

SAR QSAR Environ Res. 2003 Oct-Dec;14(5-6):413-20.PMID: 14758984 [PubMed - indexed for MEDLINE]Related articles

A naive Bayes model to predict coupling between seven transmembrane domain receptors and G-proteins.

Cao J, Panetta R, Yue S, Steyaert A, Young-Bellido M, Ahmad S.

Bioinformatics. 2003 Jan 22;19(2):234-40.PMID: 12538244 [PubMed - indexed for MEDLINE]Related articlesFree article

Vector-G: multi-modular SVM-based heterotrimeric G protein prediction.

Jain P, Wadhwa P, Aygun R, Podila G.

In Silico Biol. 2008;8(2):141-55.PMID: 18928202 [PubMed - indexed for MEDLINE]Related articles