PubMed

GECKO: a complete large-scale gene expression analysis platform.

Theilhaber J, Ulyanov A, Malanthara A, Cole J, Xu D, Nahf R, Heuer M, Brockel C, Bushnell S.

BMC Bioinformatics. 2004 Dec 10;5:195.PMID: 15588317 [PubMed - indexed for MEDLINE]Related articlesFree article

Cross-platform comparison and visualisation of gene expression data using co-inertia analysis.

Culhane AC, Perrière G, Higgins DG.

BMC Bioinformatics. 2003 Nov 21;4:59.PMID: 14633289 [PubMed - indexed for MEDLINE]Related articlesFree article

Many accurate small-discriminatory feature subsets exist in microarray transcript data: biomarker discovery.

Grate LR.

BMC Bioinformatics. 2005 Apr 13;6:97.PMID: 15826317 [PubMed - indexed for MEDLINE]Related articlesFree article

ArrayQuest: a web resource for the analysis of DNA microarray data.

Argraves GL, Jani S, Barth JL, Argraves WS.

BMC Bioinformatics. 2005 Dec 1;6:287.PMID: 16321157 [PubMed - indexed for MEDLINE]Related articlesFree article

SiPaGene: A new repository for instant online retrieval, sharing and meta-analyses of GeneChip expression data.

Menssen A, Edinger G, Grün JR, Haase U, Baumgrass R, Grützkau A, Radbruch A, Burmester GR, Häupl T.

BMC Genomics. 2009 Mar 5;10:98.PMID: 19265543 [PubMed - indexed for MEDLINE]Related articlesFree article

Tumor classification and marker gene prediction by feature selection and fuzzy c-means clustering using microarray data.

Wang J, Bø TH, Jonassen I, Myklebost O, Hovig E.

BMC Bioinformatics. 2003 Dec 2;4:60.PMID: 14651757 [PubMed - indexed for MEDLINE]Related articlesFree article

Expression profiling of human renal carcinomas with functional taxonomic analysis.

Gieseg MA, Cody T, Man MZ, Madore SJ, Rubin MA, Kaldjian EP.

BMC Bioinformatics. 2002 Sep 30;3:26.PMID: 12356337 [PubMed - indexed for MEDLINE]Related articlesFree article

Genome Expression Pathway Analysis Tool--analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context.

Weniger M, Engelmann JC, Schultz J.

BMC Bioinformatics. 2007 Jun 2;8:179.PMID: 17543125 [PubMed - indexed for MEDLINE]Related articlesFree article

Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study.

Wang J, Delabie J, Aasheim H, Smeland E, Myklebost O.

BMC Bioinformatics. 2002 Nov 24;3:36. Epub 2002 Nov 24.PMID: 12445336 [PubMed - indexed for MEDLINE]Related articlesFree article

GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies.

Zhang B, Schmoyer D, Kirov S, Snoddy J.

BMC Bioinformatics. 2004 Feb 18;5:16.PMID: 14975175 [PubMed - indexed for MEDLINE]Related articlesFree article

A Grid-based solution for management and analysis of microarrays in distributed experiments.

Porro I, Torterolo L, Corradi L, Fato M, Papadimitropoulos A, Scaglione S, Schenone A, Viti F.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S7.PMID: 17430574 [PubMed - indexed for MEDLINE]Related articlesFree article

Libaffy: software for processing Affymetrix GeneChip data.

Eschrich SA, Hoerter AM.

Bioinformatics. 2007 Jun 15;23(12):1562-4. Epub 2007 Apr 26.PMID: 17463032 [PubMed - indexed for MEDLINE]Related articlesFree article

MARS: microarray analysis, retrieval, and storage system.

Maurer M, Molidor R, Sturn A, Hartler J, Hackl H, Stocker G, Prokesch A, Scheideler M, Trajanoski Z.

BMC Bioinformatics. 2005 Apr 18;6:101.PMID: 15836795 [PubMed - indexed for MEDLINE]Related articlesFree article

RACE: Remote Analysis Computation for gene Expression data.

Psarros M, Heber S, Sick M, Thoppae G, Harshman K, Sick B.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W638-43.PMID: 15980552 [PubMed - indexed for MEDLINE]Related articlesFree article

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.

Conde L, Montaner D, Burguet-Castell J, Tárraga J, Medina I, Al-Shahrour F, Dopazo J.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W81-5. Epub 2007 Apr 27.PMID: 17468499 [PubMed - indexed for MEDLINE]Related articlesFree article

CAGER: classification analysis of gene expression regulation using multiple information sources.

Ruan J, Zhang W.

BMC Bioinformatics. 2005 May 12;6:114.PMID: 15890068 [PubMed - indexed for MEDLINE]Related articlesFree article

Vector algebra in the analysis of genome-wide expression data.

Kuruvilla FG, Park PJ, Schreiber SL.

Genome Biol. 2002;3(3):RESEARCH0011. Epub 2002 Feb 13.PMID: 11897023 [PubMed - indexed for MEDLINE]Related articlesFree article

Computational methods for gene expression-based tumor classification.

Xiong M, Jin L, Li W, Boerwinkle E.

Biotechniques. 2000 Dec;29(6):1264-8, 1270.PMID: 11126130 [PubMed - indexed for MEDLINE]Related articles

EMMA 2--a MAGE-compliant system for the collaborative analysis and integration of microarray data.

Dondrup M, Albaum SP, Griebel T, Henckel K, Jünemann S, Kahlke T, Kleindt CK, Küster H, Linke B, Mertens D, Mittard-Runte V, Neuweger H, Runte KJ, Tauch A, Tille F, Pühler A, Goesmann A.

BMC Bioinformatics. 2009 Feb 6;10:50.PMID: 19200358 [PubMed - indexed for MEDLINE]Related articlesFree article

MILANO--custom annotation of microarray results using automatic literature searches.

Rubinstein R, Simon I.

BMC Bioinformatics. 2005 Jan 20;6:12.PMID: 15661078 [PubMed - indexed for MEDLINE]Related articlesFree article